Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03277 ACCCCTCCTCGGTCCCCTTGCAAGACTCAAAACAACGAAACAAGACATTGTTTGGCTAATTCCGATTCTCGAATCGTCTTTCTTTCCACCGAAACTCGAAACCTTTTTCTCGAACTGGCTAACTCTCAGGCAAGTGCTTCGGACGCTGATTCCAGCAACAAGCGGCTGGTGCTAGCACTGTATGACGCCCTAAGCTCCGGCGACTCCGCCGCCGTCGCCAAGATCCTCGCCGCCGACCTCGAGTGGTGGTTCCATGGTCCCCCCTCACACCAGTTTTTGATGCGCATGCTCACCGGCGATTCCACCGCCGAAACCTTCCGATTCGTTCCTCAATCCACCGCCGCCTTCGGCTCCACCGTCCTCGTCGAGGGCTGCGACACCGCCCGCAACATTGCCTGGGTTCACGCCTGGACCGTCGCGGATGGGATAATTACTCAGGTGAGAGAGTACTTTAACACTGCCCTCACCGTCACCCGCTTCGAAAACTCCGGCGAGATTGTTCCCGCAAGCTCCGGCACCGGCCGCTTCCCCTGCGTGTGGGAGAGCAGCTTATCGGGTCGGGTCGGGAAATCCGTGCCCGGTTTGGTTCTGGCAATATAA 600 0.5817 TPPRSPCKTQNNETRHCLANSDSRIVFLSTETRNLFLELANSQASASDADSSNKRLVLALYDALSSGDSAAVAKILAADLEWWFHGPPSHQFLMRMLTGDSTAETFRFVPQSTAAFGSTVLVEGCDTARNIAWVHAWTVADGIITQVREYFNTALTVTRFENSGEIVPASSGTGRFPCVWESSLSGRVGKSVPGLVLAI 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03277 199 Gene3D - 38 162 - -
Viun1g03277 199 PANTHER OS07G0691300 PROTEIN 41 199 IPR009798 -
Viun1g03277 199 Pfam Wound-induced protein WI12 94 199 IPR009798 -
Viun1g03277 199 SUPERFAMILY NTF2-like 52 157 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03277 Viun-Chr1 40435627 40436585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03277 - - lja:Lj0g3v0040339.1 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03277 1 40435627 40436585 Viun1g03277 1 40435627 40436585 ECH