Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03272 ATGTCAACATCATCTTCTTCATCCTCTTCCCAAACCCTCAGAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGATAAAACAAGGCCACTCTCTCTCTGCAACTTCTCGATCCGATTACTCCGACATCTGTCTCCAAATGGGCATTCACTTTTACAGGGATGTCAGCGATTTCCTTGCTGCTGACATAGATGTGATATTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTGGGGTCAATGCCACTCGCTTCCCTGAAGCGCCCAACACTGTTTGTTGATGTTCTTTCAGTGAAAGAACACCCGAGAGAACTTCTGCTACGAGAGTTGCCACTGCACTCAGACATTCTCTGTACTCACCCTATGTTTGGACCTGTCACCGGCAAGAATGGATGGAAAGGTCTCACTTTCATGTATGACAAAGTTCGGATAAGAAATGAAGATATCTGCTCTAGTTTCATCCAAATTTTTTCCAGTGAGGGTTGCAAGATGGTACAAATGACTTGTGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATTACACACACAATTGGCAGAACATTGGCAGAAATGGATATTCAATCCACACCTATTGACACCAAGGGCTTTCAGGAACTTGTTAAATTGAAGGAGACGATGGTAGGAAATAGTTTTGATTTGTTCAGTGGATTATACGTGTATAACAGATTTGCCAGACAAGAGCTGGAAAACCTTGAACGTGCCTTGCAAAAAGTCAAAGAAACGCTGGTTGAAAAGAAGAAAGAGGAGCAGGGTCAAGAAAAGATATGA 816 0.4314 MSTSSSSSSSQTLRIGIVGFGTFGQFLAKTMIKQGHSLSATSRSDYSDICLQMGIHFYRDVSDFLAADIDVILLCTSILSLSEVVGSMPLASLKRPTLFVDVLSVKEHPRELLLRELPLHSDILCTHPMFGPVTGKNGWKGLTFMYDKVRIRNEDICSSFIQIFSSEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLAEMDIQSTPIDTKGFQELVKLKETMVGNSFDLFSGLYVYNRFARQELENLERALQKVKETLVEKKKEEQGQEKI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03272 271 Gene3D - 1 180 - -
Viun1g03272 271 Coils Coil 237 264 - -
Viun1g03272 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 174 IPR036291 -
Viun1g03272 271 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 267 IPR045011 GO:0006571|GO:0033730
Viun1g03272 271 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 175 265 IPR008927 -
Viun1g03272 271 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 13 271 IPR003099 GO:0004665|GO:0006571|GO:0008977
Viun1g03272 271 Pfam Prephenate dehydrogenase, nucleotide-binding domain 50 135 IPR046826 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03272 Viun-Chr1 40412650 40414854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03272 K15227 - gmx:100787362 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03272 1 40412650 40414854 Viun1g03272 1 40412650 40414854 ECH