Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03271 ATGAAGCCACACACTCAGGCTTCTTCTTTCGCTACTCCACTCCCGCACGTGCCTTTCTTTCGCGCCACCGCTTCCTCACGTGCCGCCCCGGCGGAATCTCTCCATGCCGCCGCCGCCGCCAATGAATTCCGTCGCATCTGGACTGCGAAACTCCGCCGCGTCCACCTGTCCGTTCGCCACTCCACACGCGTCGCTGCGGCTTCTAATCCGAGCGGCTCCGGTGGCGATTATAGTCAACCTCGGAGCAGCCGGCGCGGCGTGCTGATGGTACCGTTCCTGGCTGCCGGCGCGTCGGTTCTGTTATCGGCGGCAGCGAGGGCGGAGGAGAAGGCGGCGGAATTGGCTCCGACAGCGCCGAAGCTGGAGGAGGCGAAAAAGAAGGAGGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGGTGTATTTGGGGGAAGCGGAACAGGTTCCGGTTCGAGACGATAGGGAGTTGGAGCTTGAGATTGTGAAAAATTTGCATAGGCGCTGTTCGGAGAAGGAAAAAAAACTGTCTCTTGCGCTGGAAGCTTTTCCCTCTAATCTTCAGGAACCGCTCAACCAGTATATGGAGAAGAAGATAGATGGAGACACCTTGAAGTCTTATACGTTGCATTGGCCACTTCAAAGATGGCAGGAGTATGAACCTATTCTGAACTACTGTCGTGAAAATGGAATCCGTCTAGTCGCTTGTGGTACTCCGCTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTTTATGCTCCTCCAGCTGGTTCGGGCTTTGTATCGGGCTTTACTTCTATCTCACGTAGACCTTCAGTCGATAGTACTCAAAATCTGTCTATTCCTTTTGGTCCGAGCTCATACCTTTCGGCACAGGCTAAAGTAGTTGATGAGTATTGTATGTCCCAGGTTATCTTACAAAATGTGCTTGATGGAGGGTCCACTGGTATGTTAATTGTTGTGACTGGTGCAAGCCATGTTACGTATGGATCTAGAGGAACCGGGGTGCCAGCTAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTGGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGATCGTGCTGAGATTGCTCGCGTAATGAATGCTGCTGGGCGGAGGCGAGATGCCCTACCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCTCCAGAGGTTTTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCCATATCAATAACAACTACATTGTTGGCGCAATATGAAAAGCGAAAAGATAATTTTTTCCAAGAGCTTGACTACGTTATTACAGACACTGTCAGAGGATCAGTAGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAGCACCTGACAACATTGGTTCTCTAATGGGACTTCTAGGTTCCATCCCGGACAATGCATTTCAAAAGAATCTGGCAGGGACAAACTGGAACCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATTGGAGCCGTGGCTTCATCAAATTCTCTATACGGAATCCGTAAATTCCTTAATCCAGCCGTTGTCACTGAACAACAGATTATAAGGTCACCAGTACTCAAAACAGCTGTAATATATGCTTGCTTTCTTGGAATTTCTGCAAATCTCCGTTATCAGGTAATTGCTGGGTTAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCCCAGACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACTGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTGCAAGTTAGAAAGACAGAGTCGCCAACCTCAGATTCTCCGAATAGTGCTGCAATTTTATGCAACGAAGCAGAAGAAGCCACCATTGATGAGATAGAAAAATAA 2232 0.4718 MKPHTQASSFATPLPHVPFFRATASSRAAPAESLHAAAAANEFRRIWTAKLRRVHLSVRHSTRVAAASNPSGSGGDYSQPRSSRRGVLMVPFLAAGASVLLSAAARAEEKAAELAPTAPKLEEAKKKEEEEVITSRIYDAAVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCSEKEKKLSLALEAFPSNLQEPLNQYMEKKIDGDTLKSYTLHWPLQRWQEYEPILNYCRENGIRLVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFVSGFTSISRRPSVDSTQNLSIPFGPSSYLSAQAKVVDEYCMSQVILQNVLDGGSTGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKDNFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNLAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGIRKFLNPAVVTEQQIIRSPVLKTAVIYACFLGISANLRYQVIAGLVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPTSDSPNSAAILCNEAEEATIDEIEK 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03271 743 Gene3D - 131 300 - -
Viun1g03271 743 MobiDBLite consensus disorder prediction 62 80 - -
Viun1g03271 743 MobiDBLite consensus disorder prediction 60 82 - -
Viun1g03271 743 SUPERFAMILY EreA/ChaN-like 155 411 - -
Viun1g03271 743 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 36 741 - -
Viun1g03271 743 CDD ChanN-like 164 388 IPR007314 -
Viun1g03271 743 Pfam Haem-binding uptake, Tiki superfamily, ChaN 156 375 IPR007314 -
Viun1g03271 743 Pfam Protein RETICULATA-related 482 666 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03271 Viun-Chr1 40406644 40412254 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03271 - - gmx:100810366 1272.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03271 1 40406644 40412254 Viun1g03271 1 40406644 40412254 ECH