Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03270 ATGGAATCCTCCGCTGTCATTCGATCTTTTAACTATCCCATGGGCACTATGTCCCATATGCGACCTTCCCGCGATAAACAAGTTGTAGTTCCCATCCACAATGTCGGATGGAACTCTAAAAGTAGACTTTTCACCCAGCATTTGTCATATGATCGGAAGCACATTAATTCCCACATGAAGGGGAGCACCACACTGGTTTCATGTGCAAAAACAGCTGAACCTATCAACACATCCAAGTCTGGTGATGATGTTGCAGCTTCTTCAGATAGTACTCCACAAGGCTCGTTGGAGAAAAAGCCTTTGCAAGCTACTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTGTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAACGGTTCCTTTGTCTAACATTTCACCAACGACTCCTCCGCCTATTCCATCTAAACCTATGGATGAATCAGCACCTGGTACCCTGCCACCATCACCTCCAAAATCATCTCCAGAAAAGAAAAATCCATTTATAGATTCTTTCAGAGAGAAATCACCAAGATTGGCAGCATTGGAGGCTTCTGGTACCACCACTTATGTCTTAGTACCATCTCCCACGGTTGGCTTCTTCCGAAGAGGTAGAACAGTGAAAGGCAAGAGACAACCTCCTATCTGTAAAGAGGGAGATTTAGTCACAGAAGGGCAAATCATCGGTTATTTGGACCAGTTTGGCACTGGACTTCCGGTTAAGACTGATGTGGCTGGAGTAGTGTTGAAGCTAGTTGTTGATGATGGAGAGCCTGTTGGTTACGGAGACCCCCTTATTGCTGTCTTGCCATCTTTTCATGACATCAAGTGA 888 0.4403 MESSAVIRSFNYPMGTMSHMRPSRDKQVVVPIHNVGWNSKSRLFTQHLSYDRKHINSHMKGSTTLVSCAKTAEPINTSKSGDDVAASSDSTPQGSLEKKPLQATTFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATTVPLSNISPTTPPPIPSKPMDESAPGTLPPSPPKSSPEKKNPFIDSFREKSPRLAALEASGTTTYVLVPSPTVGFFRRGRTVKGKRQPPICKEGDLVTEGQIIGYLDQFGTGLPVKTDVAGVVLKLVVDDGEPVGYGDPLIAVLPSFHDIK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03270 295 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 41 295 - -
Viun1g03270 295 MobiDBLite consensus disorder prediction 146 188 - -
Viun1g03270 295 MobiDBLite consensus disorder prediction 74 102 - -
Viun1g03270 295 MobiDBLite consensus disorder prediction 151 181 - -
Viun1g03270 295 Gene3D - 208 287 - -
Viun1g03270 295 Pfam Biotin-requiring enzyme 230 285 IPR000089 -
Viun1g03270 295 CDD biotinyl_domain 212 287 - -
Viun1g03270 295 SUPERFAMILY Single hybrid motif 207 286 IPR011053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03270 Viun-Chr1 40398182 40404134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03270 114 289 Acyl Lipid Metabolism Gene Families AT5G15530 25.424 2.55e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03270 - - gmx:100792471 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03270 1 40398182 40404134 Viun1g03270 1 40398182 40404134 ECH