Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03264 ATGCCATCCTCCGTTCAGTTGGAAAGGTTCAATCCTATAACCGACGCCGCCACTACCTCTTCCGCTGCAATCGCCAACGGCGTAAACTGCCCCAAACAGTCTCAAGCGACGCCTCCCGCCGCTGCGCGCCGTCTCCTGGTGCCCTCTCTCCCCGACGCGGTGGCGCGGCACCACGCGCGCGTGGCGGGGCCGAACCAGTGCTGCTCCGTGGTCGTCCAGGCGATCAGCGCCCCCGTCTCTGCCGTGTGGGCGGTGGTGCGGCGCTTCGACCACCCGCAGGGCTACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGACGGCATTCGCGTGGGCGCCGTCCGCGAGGTGAGGGTGGTGTCGGGGCTCCCCGCGGAGTCGAGCACAGAGCGTCTGGAGATCCTGGACGACGAGCGCCACGTGATGAGCTTCAGCGTGGTCGGCGGCGACCACCGGCTGAGGAATTACCGGTCGGTGACGACGCTTCACGCTAGCGGGAACGGGACACTTGTTATGGAGTCGTATGTGGTTGACGTACCGCAGGGTAACACTAAGGAGGAAACGTGCGTGTTCGTGGACACCATCGTACGTTGTAACTTGCAGTCGCTGGCTCAGATCGCTGAAAATAACACCCCAATCTCTGAACACCAAAACTGTTGA 663 0.629 MPSSVQLERFNPITDAATTSSAAIANGVNCPKQSQATPPAAARRLLVPSLPDAVARHHARVAGPNQCCSVVVQAISAPVSAVWAVVRRFDHPQGYKNFVKSCHVITGDGIRVGAVREVRVVSGLPAESSTERLEILDDERHVMSFSVVGGDHRLRNYRSVTTLHASGNGTLVMESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENNTPISEHQNC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03264 220 Pfam Polyketide cyclase / dehydrase and lipid transport 69 209 IPR019587 -
Viun1g03264 220 PANTHER - 66 209 - -
Viun1g03264 220 Gene3D - 31 219 IPR023393 -
Viun1g03264 220 CDD PYR_PYL_RCAR_like 67 209 - -
Viun1g03264 220 FunFam Abscisic acid receptor PYL4 28 220 - -
Viun1g03264 220 SUPERFAMILY Bet v1-like 67 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03264 Viun-Chr1 40325520 40326766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03264 K14496 - gmx:121174020 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03264 1 40325520 40326766 Viun8g02386 8 33742974 33744224 ECH
Viun1g03264 1 40325520 40326766 Viun1g03264 1 40325520 40326766 ECH
Viun1g03264 1 40325520 40326766 Viun8g02386 8 33742974 33744224 PCT