Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03259 ATGATTCCTCGGCTTCTGGGTGTCTATATAAACCGCCAATTCTTAATCAACGTTCGACACATCCTACGTTCCTTTGTTGCAGCAATTCAGACATCATACGATTTGGTTACCATGTCCAATCCCAAATCCGAGTCAGTGTCAGAACCCTCCGTTTCAGAGCCTCCACCGTCGCAACCCTCTGTGCCCATTTCCTACCCAATCAAAACACTTGAGGAGTTGGAGTCTCGCTCGTATTTCGACTCCTTTCACTACCCTTTCAACAGGGCTTCAGTTCCCATTCTCAATGGAGATTCTTCTTCGTTGCCCCAGAGGCGAAGATTGCTTGTGTGCCATGACATGGCTGGGGGCTACTTGGATGACAAGTGGATTCAAGGTGGCACTAACCCCGATGCTTATGCCATTTGGCATTGGCACTTGATCGATGTTTTTGTCTACTTTTCACACAGTCTCGTTACTCTTCCTCCTCCCTCCTGGACTAACACTGCTCATCGTCACGGCGTTAAGGTGTTGGGGACTTTCATTACTGAATGGGATGAGGGAAGGACTGCCTGTGATACATTGCTTTCAACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCCGCTGATTTAGGTTTTGATGGGTGGCTAATAAATATGGAAGTGAATTTGGATCGGGGTCAAATACCTAATTTGATAGAGTTTGTAGACCATTTATCACTAACAATGCATTCTTCTGTTCCTGGATCGTTAGTGCTATGGTATGACAGTGTTACAGTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACATAATAAGCCATTCTTTGATATATGTGACGGAATATTTGTGAACTATACATGGAAGGAAGATTATCCAAGGCTCTCTGCTGCTGTTGCAAACGAGCGGAAGTTTGATGTGTACATGGGAATCGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAGATGTTGCTCTTGATTTACTAAGAAAGAATGATGTCTCTGCTGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAGCACCAGATTTTGAAACTGCTCAGAATAGTTGGTGGGGTCTGGTGGAAAAGTCATGGGGAATACAGCGAAATTTTCCTGGACCATTACCATTCTACACTAATTTTGATCAGGGACGTGGTTACCATATTTCAGTTGATGGCGGCAATGTATCAGATAGTACTTGGTGCAACATTTCTTGCCAAGGTTTCCAGCCACAACTTATGTTTGACGATCCTTCAAATTCTATTCAAGTTTCTGTAGACTTGAAGGAAGCATCATATAGTGGAGGTGGAAACATTAAATTCAAAGGATCCCTTGAAGAGAAAACTTGCTTTGAGAGCAAAATCTTTCAAGTAGGGTTTCTTTTGAGCGAGTTGCCTGTCCACTTTACTTATACTGTGAAATCGGATGGCAATTCTTCATTAGGACTTAAGCTCGAATTCACCTCCACTGGCGATGGCAGAAGAGCATCTATGCTTCTTGCATCCAGGGCAGTGAATCACTTTCCAAACAAGTTCAGCAAAGTAATCATGACTCGTGAACGTAAGGGATTTTCCTCTGGATGGGTTATAAATGAAGGTGTAGTTGCAATGAATGGATACACTTTAACAGAAATCCATGCAGTGTGCTATAGATCAGATTCAAATGACAATGATGGAACTGTAGCTTCCCCATCAGATTATTTTGCACTTCTTGGTCACATCACAATCAAGACTTTGGACTATAAGTCAGATTTTCCTCTGTCTTCTTCCTGGCTAGTTGATGGCACCTGCATAAAGTGGACATCAGACCCTCTGGGTTCAAAGACCCTTGATGTTAAAATTTCTTGGAAATTAAAAAATGAGAATAGTTATCTGTTTCCGAAGTTCAACGTTTACTTGGTAAAATTATCAAAACAAGCAGGTGGCAATCCAGGTACAACATTGGAGGATGCAAAAGAGTACCTTGGAGTAGCACACGTAAGCTGTTTCTATGTTTCTGACCTCAAAGTTCCTTCAGACACTTCTACTCTCAAATTTATAATACAAGTCTGCGGTGTAGATGGGACAATTCAAGAATTGGACGAGTCTCCATATTATGAATTGGAGATTGAAGCTCCTTAA 2139 0.4198 MIPRLLGVYINRQFLINVRHILRSFVAAIQTSYDLVTMSNPKSESVSEPSVSEPPPSQPSVPISYPIKTLEELESRSYFDSFHYPFNRASVPILNGDSSSLPQRRRLLVCHDMAGGYLDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFITEWDEGRTACDTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDRGQIPNLIEFVDHLSLTMHSSVPGSLVLWYDSVTVDGKLNWQDQLNEHNKPFFDICDGIFVNYTWKEDYPRLSAAVANERKFDVYMGIDVFGRNTYGGGQWNVDVALDLLRKNDVSAAIFAPGWVYETKQAPDFETAQNSWWGLVEKSWGIQRNFPGPLPFYTNFDQGRGYHISVDGGNVSDSTWCNISCQGFQPQLMFDDPSNSIQVSVDLKEASYSGGGNIKFKGSLEEKTCFESKIFQVGFLLSELPVHFTYTVKSDGNSSLGLKLEFTSTGDGRRASMLLASRAVNHFPNKFSKVIMTRERKGFSSGWVINEGVVAMNGYTLTEIHAVCYRSDSNDNDGTVASPSDYFALLGHITIKTLDYKSDFPLSSSWLVDGTCIKWTSDPLGSKTLDVKISWKLKNENSYLFPKFNVYLVKLSKQAGGNPGTTLEDAKEYLGVAHVSCFYVSDLKVPSDTSTLKFIIQVCGVDGTIQELDESPYYELEIEAP 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03259 712 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 29 706 IPR032979 GO:0033925
Viun1g03259 712 FunFam Cytosolic endo-beta-N-acetylglucosaminidase 1 isoform A 380 566 - -
Viun1g03259 712 Pfam Glycosyl hydrolase family 85 117 394 IPR005201 GO:0005737|GO:0033925
Viun1g03259 712 CDD GH85_ENGase 108 417 - -
Viun1g03259 712 FunFam cytosolic endo-beta-N-acetylglucosaminidase 56 376 - -
Viun1g03259 712 Gene3D Glycosidases 57 376 - -
Viun1g03259 712 Gene3D - 380 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03259 Viun-Chr1 40284047 40290919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03259 57 710 Glycoside Hydrolase AT5G05460 56.364 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03259 K01227 - gmx:100804658 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03259 1 40284047 40290919 Viun1g03259 1 40284047 40290919 ECH