Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03257 ATGCTTCTCAGAACCGCTTCTTCTTTCTCTCTACTCAACCCCAACGCCAACGCCAACGCCAACACCAACGCCGACCATATACTCCCTCTCATAAACCCTTCTTCTGCTATTCGCTGCAACTCTCATGCCAAAAGCTTCGTTCCCTGCGCCACCAAGGGCTCCAACAACCGTCCCTTAACCGGCGTCGTTTTTGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTTGTCCCCACACTTCCAGAAGCTTCCCTTGCTCGCCAGAAGTACACCAATGAGTGCGAGGCTGTTGTCAACGAACAGATCAATGTGGAGTACAATGTTTCGTATGTTTATCATGCGATGTTTGCCTACTTCGACAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAATTTTTTAAGGAGTCAAGTGAGGAGGAAAGGGAGCATGCTGAGAAATTGATGGAGTATCAGAACAAACGTGGTGGAAAAGTGAAGTTACAATCTATTGTGATGCCTCTTTCTGAGTTTGACCATGAGGAAAAGGGAGATGCCCTGTATGCAATGGAACTTGCTCTGTCTTTGGAGAAGTTGACAAATGAGAAGCTTCTTAACTTGCACAGTGTTGCCTCAAAGAACAATGATGTGCAATTAACAGATTTTATTGAAAGCGAATTTTTAGGTGAACAGGTCGAAGCTATTAAAAAAATCTCTGAGTATGTTGCCCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAAATGTTGCTCCATGAGGAGGGAGTTACTGCTTGA 786 0.458 MLLRTASSFSLLNPNANANANTNADHILPLINPSSAIRCNSHAKSFVPCATKGSNNRPLTGVVFEPFEEVKKELDLVPTLPEASLARQKYTNECEAVVNEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLTDFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVTA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03257 261 Coils Coil 133 154 - -
Viun1g03257 261 Pfam Ferritin-like domain 98 240 IPR008331 GO:0008199
Viun1g03257 261 ProSitePatterns Ferritin iron-binding regions signature 2. 208 228 IPR014034 -
Viun1g03257 261 SUPERFAMILY Ferritin-like 82 255 IPR009078 -
Viun1g03257 261 Gene3D - 57 258 IPR012347 -
Viun1g03257 261 ProSiteProfiles Ferritin-like diiron domain profile. 88 241 IPR009040 -
Viun1g03257 261 CDD Euk_Ferritin 92 251 - -
Viun1g03257 261 FunFam Ferritin 57 257 - -
Viun1g03257 261 PANTHER FERRITIN 67 255 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03257 Viun-Chr1 40261481 40264153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03257 K00522 - gmx:547476 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03257 1 40261481 40264153 Viun8g02381 8 33684304 33687057 ECH
Viun1g03257 1 40261481 40264153 Viun1g03257 1 40261481 40264153 ECH
Viun1g03257 1 40261481 40264153 Viun8g02381 8 33684304 33687057 PCT