Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03254 ATGTGGCTACCATGGCGTGTCCGAACTACAGCTTCCCGTCCCAACCGATCCCGATCCCGATCCCGATCCCGAGCCTCCACCGTCTCCTGCACGTCCTTCAAAGACATACAAACCCTCCTAGCTTCCGAACCCGAACCTAGCTCTCCCAAATCGCCCTCCCTTTTCCGCCGTCTCTCCATGTCCCCCTCCCTCCTCCGTTCCCTCAGCGGCACCCGCGCCGCCGCCCCTTCCTCCTTCGCGCCGCCGCCGGACTCCGACTGCGCCTCCGTCGTCCTTTACTACACCAGCCTCCGCGTCGTCCGCCGCACCCACGACGACTGCCGCGCCGTCCGATCCATCCTCCGCGGCTTCGCCGTCGCCATCGACGAGCGCGATGTCAGTGTCGACGACCGCTTCCGCGAGGAGCTGCAGTGGATTCTCGGCCGCCGCACCGTGCCTCTTCCGAGCGTCTTCATCGCCGGAACCTACATTGGCGGCGCTGACGACGTTCGGCGACTCTACGACAGCGGCGAGTTGCACGAGCTGGTCGAACGGCTGCCGTTGTCGCGTAGCATCGCATGCGGTCTCTGCGGAGGGCTGAGATTCGTTGTGTGCGACACGTGCGATGGAAGCCATAAAGTGTTCGCTGAAAAGAGTGGCGCCTTCAGGATCTGTTCTTCCTGCAATTCCAACGGTTTGATCAGGTGCCCTTCCTGCTTCGTGGTGCACCAGCGACACAGCAAATAA 726 0.6309 MWLPWRVRTTASRPNRSRSRSRSRASTVSCTSFKDIQTLLASEPEPSSPKSPSLFRRLSMSPSLLRSLSGTRAAAPSSFAPPPDSDCASVVLYYTSLRVVRRTHDDCRAVRSILRGFAVAIDERDVSVDDRFREELQWILGRRTVPLPSVFIAGTYIGGADDVRRLYDSGELHELVERLPLSRSIACGLCGGLRFVVCDTCDGSHKVFAEKSGAFRICSSCNSNGLIRCPSCFVVHQRHSK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03254 241 Pfam Glutaredoxin 91 157 IPR002109 -
Viun1g03254 241 CDD GRX_GRX_like 89 229 - -
Viun1g03254 241 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 28 232 - -
Viun1g03254 241 MobiDBLite consensus disorder prediction 1 29 - -
Viun1g03254 241 Gene3D Glutaredoxin 86 178 - -
Viun1g03254 241 SUPERFAMILY Thioredoxin-like 88 176 IPR036249 -
Viun1g03254 241 ProSiteProfiles Glutaredoxin domain profile. 78 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03254 Viun-Chr1 40247290 40248421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03254 K17479 - gmx:100807688 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03254 1 40247290 40248421 Viun8g02370 8 33589988 33591042 ECH
Viun1g03254 1 40247290 40248421 Viun1g03254 1 40247290 40248421 ECH
Viun1g03254 1 40247290 40248421 Viun8g02370 8 33589988 33591042 PCT