Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03249 ATGGCGAACTTGGACGAACTCTTATCTTCCTTAATATCAGACATCCATTCCTACACCGGCAAAGACCCTCTTCTCCCATGGCTTCGCGCGATCCGAAAGATAAAGGATACCCTTCCTCCAAAAATCCTAAAGGAAAAACTACCGGCGTTCTTGCAGAAATGTGCTCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATATTCGAGTGTGGCTCCATCTGATGGATTTTGTGAGTGATCCAAAAACACTTTTGAGTACCATGGAGCTTAATCGCATTGGGACAAAACGTAGTGAATTCTACCAAGCCTATGCTCTTTACTACGAAAAGTGCAAGAAGTACGATGAAGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAACCTTTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGTATGGAGCAGCGAAAAAGTAATAAGAGAACCCAGCATCAGGAAGCAAAAGCTGCCAGGAGGCCTTTGTCAGCAAAGAGTTCCGATGACAAGAAAACAGAGGGAAGCAAGAAATTTCGTGGTGATGATACAGTTGTAGTCAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGACTGTTCCATTGCGCAGGAAATCTCATAAAAACCATTCAAAAGAAAGTCGTAGTACAAAGAACGAGTTTGAGGTTTTTGTTGATGAAAACCTGGATCATGGAATCAAAACATCCGGTTCATCATCACTTCAGAAAAGGACTGAAGCCAGCCAACCTCACCAAGAACCGTTCCAGATATACATTGATGGTGAAGAACATTCTGAGACCAGTAATGCGAATTTGTCTGAAGGTGGTTCTGCTTCATCGGCTTCGCAATCAAATGGCTTCGTTTTTCTCCGCCCCAAGGATATTACTTCTGAAAAATCTAGTGACATGGATGCTGACAGCCGTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAAATTTGTTGGTTCCACCATTTTGGATGAACCAGAGGTGGAAAATGTTTGTCACCACGGTTTAGTGGACCCCACCATCAACTTGAAGGAAGCTATGGATGATATAAATAACATGTTTGGGAAGCCGATAGATTTTGTTAGGAAAAGAAGAATCACCAAGCAGGAGAAAGCACCCCAGAGCAATAAGGGAAATGACTTCGGTGGGTTTTCAATCCTTGCTGACGATGACCACCTGGAACAGCAAGTTCCACCACCACCAACACGGAAATTGCATGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTCTTCTCACAAAGGAAGCCATGGACGATATAAACAAAATGTTTAACATGCCCCTGAATTTTTAG 1452 0.4304 MANLDELLSSLISDIHSYTGKDPLLPWLRAIRKIKDTLPPKILKEKLPAFLQKCAHTFELDRRYRNDMRYIRVWLHLMDFVSDPKTLLSTMELNRIGTKRSEFYQAYALYYEKCKKYDEAEKMYHLGVKNLAEPLDKLQKSYEQFLQRMEQRKSNKRTQHQEAKAARRPLSAKSSDDKKTEGSKKFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLRRKSHKNHSKESRSTKNEFEVFVDENLDHGIKTSGSSSLQKRTEASQPHQEPFQIYIDGEEHSETSNANLSEGGSASSASQSNGFVFLRPKDITSEKSSDMDADSRRNSKFREDTVVCKFVGSTILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRKRRITKQEKAPQSNKGNDFGGFSILADDDHLEQQVPPPPTRKLHGKSKESDLFEPTLLTKEAMDDINKMFNMPLNF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03249 483 ProSiteProfiles BUB1 N-terminal domain profile. 11 168 IPR013212 -
Viun1g03249 483 MobiDBLite consensus disorder prediction 272 293 - -
Viun1g03249 483 Coils Coil 135 166 - -
Viun1g03249 483 MobiDBLite consensus disorder prediction 272 292 - -
Viun1g03249 483 FunFam Mad3/BUB1 homology region 1 10 168 - -
Viun1g03249 483 Gene3D - 9 167 - -
Viun1g03249 483 MobiDBLite consensus disorder prediction 306 325 - -
Viun1g03249 483 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Viun1g03249 483 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 483 IPR015661 GO:0007094
Viun1g03249 483 MobiDBLite consensus disorder prediction 150 184 - -
Viun1g03249 483 SMART mad3_bub1_i 4 128 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03249 Viun-Chr1 40225989 40228420 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03249 - - gmx:100806627 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03249 1 40225989 40228420 Viun1g03249 1 40225989 40228420 ECH