Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03203 ATGGCTTTTTCCTCAAAAGAAGAGAAATCCAAGAGAATAATGAGGGGCTTGAAGACCGTCTTCTTCTTGATCACTATGGTTATATCGCTTCTTCTTTTCTCTGCCCCGGTTCTTCTCGTTGTCGCCGATGCGCTTCTTCCTTCGGCTCTTCTCTCCACGATTTCCTCCTCTTCTCTCTCCTTGGAAAATCTCGCTTCCCATTTCCACGACTACGATTTCCGATACTCCCTCGTTGATATACCCCTCATCTCCATAATACGATCCTTCATCATCTTCTGTGTTTATAGCTTGTGTGACGGACCCAGGCTTTCGCACGGACCTTATTTGGGGATTACGACCATGTGTTCTGTATTGTCTCTGATGTTTGTGTCGTTGAAGGCTGTTTACATCTTCAGTGTTTCGGGGATTGATCGAAGTGGGTATGTTGGAGGGACCGAAATAGCTCTGTTCGTATGCTCTTGTGCGTTGGCCGTGGGGCATGTTGTCGTGGCCTACAGAACAAGTTGCAGGGAAAGAAGAAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGCAAAAATGGGTATCCCAGGTATCCCAAGATTCCTCAGGAAGAACGAATCAAATGA 618 0.4563 MAFSSKEEKSKRIMRGLKTVFFLITMVISLLLFSAPVLLVVADALLPSALLSTISSSSLSLENLASHFHDYDFRYSLVDIPLISIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLSLMFVSLKAVYIFSVSGIDRSGYVGGTEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYPKIPQEERIK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03203 205 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 5 204 - -
Viun1g03203 205 Pfam Cholesterol-capturing domain 56 130 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03203 Viun-Chr1 39940446 39943206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03203 8 200 Miscellaneous Gene Families AT1G80280 42.647 2.21e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03203 - - gmx:100811069 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03203 1 39940446 39943206 Viun1g03203 1 39940446 39943206 ECH
Viun1g03203 1 39940446 39943206 Viun8g02330 8 33283585 33284636 PCT