Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03174 ATGGCGTCATCGCGTCCCCCACCGTCGAAATCAGTGGATCTGGACCTCACCATCGTGGCGGCGAAGCACCTCAAGAACGTCAACTGGAAGAACGGCGATCTGAAGCCCTACGTCGTTTTCTGGGTGGACCCCGAGCGCCGTCTGGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGCTTCGCCCTCCCCCTCCCTCTCCCACTCCACGACTCCTTCCTCACCCTCGAGATCTTCCACTCCAAACCCTCTGACACCCTCAAACCCCTCGTCGCCACCCTCCGCCTCCCTCTCAAAGACCTCCACGACCTCCACGACTCCACGCGCCTCCGCAAGTTCCCCCTTTCCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTTAAACTTGGCCTCCTCGGCCGCCCCCAATTCCAATCCCTCGACTATCTCAACCCTAACCCCAACCCCAACCCTAACCCTAATCCTAACCCCAGTCCCAATCCCAATCCCAACCCCAACCATAACCCTAATTTCGTCTTCTACAGGGGATATTCCCACTCGCCTTCTCCACCACCCTCCCCATACCCATCGTACCCCTCTTACCCCGATTCCTATAATTCTTCTTACTACCCTGGTTACTATTCTGGTGCTCCTCCTCCTCCTCCTCCGAGACCCTTCTTCGACCGTTACGCTGGGCCCAGTGGGCCTTCCGCTCCGCTTGATTATTCCACTTCCTACGACCCCAAGCCCAGACCTTCCAAAATGGGCCTAGGTGCTGGCCTCGCTGTTGGCGCTGTTGCTGGAGCGCTCGGTGGGCTTGCTCTTGAGGAGGGGCTTAAATACGAAGAAGACAAAATCGCGGAGAGGGTCGAGAACGACGTCGCTGCTAGTATTGCGCGCGACGATTACAGCGATTATCGAGTGGATTACTGA 930 0.5892 MASSRPPPSKSVDLDLTIVAAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHDSFLTLEIFHSKPSDTLKPLVATLRLPLKDLHDLHDSTRLRKFPLSRPSGRPHGKIHLKLGLLGRPQFQSLDYLNPNPNPNPNPNPNPSPNPNPNPNHNPNFVFYRGYSHSPSPPPSPYPSYPSYPDSYNSSYYPGYYSGAPPPPPPRPFFDRYAGPSGPSAPLDYSTSYDPKPRPSKMGLGAGLAVGAVAGALGGLALEEGLKYEEDKIAERVENDVAASIARDDYSDYRVDY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03174 309 MobiDBLite consensus disorder prediction 152 172 - -
Viun1g03174 309 Pfam C2 domain 13 108 IPR000008 -
Viun1g03174 309 MobiDBLite consensus disorder prediction 220 250 - -
Viun1g03174 309 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Viun1g03174 309 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Viun1g03174 309 SMART C2_3c 13 115 IPR000008 -
Viun1g03174 309 Gene3D C2 domain 3 138 IPR035892 -
Viun1g03174 309 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Viun1g03174 309 MobiDBLite consensus disorder prediction 144 194 - -
Viun1g03174 309 PANTHER INGRESSION PROTEIN FIC1 14 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03174 Viun-Chr1 39771102 39772671 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03174 - - gmx:102662889 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03174 1 39771102 39772671 Viun1g03174 1 39771102 39772671 ECH