Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03152 ATGGTTGCATTCTCCCTCTTCATCCTCTGTTCCTTAATCATCCTCGTCCAGCCGTCTTTTTCCTCCACGCAGCCCCCCAATCTCGACCCTGACAGCATCAAAATCTTCGGCGACGCCCACGTTGTCACCAACAACGACGCCGCCCCCCACGTGCGCCTCACCAACCCCTCCCTCTCTTCCTCCGGTCTCCTCCGCCGCCCCGAGCCCCTCGTCTTCGCCGACGCCAATACCACCCTCTCCACCGAATTCTCCTTCTCCATCTCCGGCAATGGCGACGGCGTCCTGTTCCTCCTCACCGCCGCTTCCGGCAACGGTTCGGATACCGTCGCCGTCGAGTTCGACACGTCCAAGGATGAAAATGTAGGAGACCCCAACTCGAACCACGTTGGCATCGACGTCGGAACACACGTGTCCCTGGCTGTCGCGAATGCTTCCGACGTGGGTCTGGTTCTGAATAATGGGGAAAAGTTGAATGCTTGGGTTGATTATGAAGGTGGTTCTAAGGTGATGGAGGTTAGGTTAAGCAAATGGGGTGAACAAAAGCCTTCCGATCCCATTGTTTCTCATAAGATTGACTTTTCTAAAATGTGGGGTGGGAATTCTGTGTTCGCGGGTATAACTTCTTCCAATGGTGGCCACTCGCTGCAGGTTGTGAGTATCTATTCGTGGAAGCTTAGATTGAAGAAAGATCCAAATGGGTTGCATTCTCATCCTGTGGATCCGAATGGTTTATCGGAGGATGAGCATAGGAGAGTTTGTCCTCTGACGGTTCTTGCTGGGGTGATTTTTGGAACTGGGTGTCTTGCGTTGATGACGTTTGTGGTGCTGTTTATGTGGGTGATTTTCTTCCAAAAGAGTGCGGAGGAGTCTCTTGCGAGAATCCCTGATCACTCTTCGGATATCAGGTATGAAAGAATTGATGTGGCTGTCGACAAGAATGCGCAGGATGATGAGAGTTAG 960 0.5229 MVAFSLFILCSLIILVQPSFSSTQPPNLDPDSIKIFGDAHVVTNNDAAPHVRLTNPSLSSSGLLRRPEPLVFADANTTLSTEFSFSISGNGDGVLFLLTAASGNGSDTVAVEFDTSKDENVGDPNSNHVGIDVGTHVSLAVANASDVGLVLNNGEKLNAWVDYEGGSKVMEVRLSKWGEQKPSDPIVSHKIDFSKMWGGNSVFAGITSSNGGHSLQVVSIYSWKLRLKKDPNGLHSHPVDPNGLSEDEHRRVCPLTVLAGVIFGTGCLALMTFVVLFMWVIFFQKSAEESLARIPDHSSDIRYERIDVAVDKNAQDDES 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03152 319 ProSitePatterns Legume lectins beta-chain signature. 109 115 IPR019825 -
Viun1g03152 319 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 13 297 - -
Viun1g03152 319 Gene3D - 18 237 - -
Viun1g03152 319 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 226 IPR013320 -
Viun1g03152 319 CDD lectin_legume_LecRK_Arcelin_ConA 18 226 IPR001220 GO:0030246
Viun1g03152 319 Pfam Legume lectin domain 105 232 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03152 Viun-Chr1 39682314 39683841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03152 37 311 Receptor kinase-like Gene Family AT5G03140 26.300 1.45e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03152 - - vra:106757171 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03152 1 39682314 39683841 Viun1g03152 1 39682314 39683841 ECH