Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03140 ATGGAGCAAGAAATGGAGAAGGGAAAGGAAAGTGAAGAAAAATGGGTGCATGATGCATCTGTCGACTATAAAGGCAGAGTTCCTCTCCGTGCCTCCACTGGTGTATGGAAAGCCTCCTTCTTTGTCCTCGCAATTGAATTTAGTGAAAGATTGAGCTACTTTGGAATAGCCAATAATCTCATCTCGTACCTTACAAAAGTGATGCATGAAGACCTCAAAACAGCAGCCAAGAATGTAAACTACTGGTCAGGAACAACAACCCTGATGCCTCTGGTTGGGGGATTTATTGCTGATGCTTACACTGGTCGATTTTATATGGTTCTGTTCTCCGCTTTTGTGTACCTCATGGGATTAAGCCTTTTGACGATGTCTCAATTCATCCCAAGTATAAAGGCTTGCAACAGTAGGATATGCCAACAACCAAGGAAGATTCATGAAGTGGTTTTCTTCCTTTCCCTTTACTGTATCTCCGTGGGCACAGGAGGATACAAACCATGCTTGGAAAGCTTTGGAGCTGACCAATTTGATGATGATAACTTGGAAGAAAGGAAGAAGAAGATGTCTTTCTTCAACTGGTGGTACTTTTCACTGTGCTTTGCATTGCTACTCAGTGCAACAGTGGTTGTTTATGTTCAAGACTTTGTCAGCTGGGGAGTAGCTTGCTTAGCCATTACTATTATTATGGTTATCACCGTCATAGCTTTCTGCGTGGGAAAACCATTTTACAGGTACAGAAGGACAGAAGGAAACCCTTTAACACCAATTTTACAAGTCTTAGTTGCTGCAGTAAGGAAAAGAAATTTGTCTCTTCCTTCAAATCCTGCTTTATTGTATGAGGTCCCAGAGTCAAAGAGGTCCCAGGGAAGGCTTCTAAAACACACCAGCAGGCTCAGGTTTCTTGACAAAGCTGCAATAATTGAAGATAAACATGCCGGGCGGAAGGAGAGTCCATGGAGATTAGTGACAGTGACAAGAGTAGAAGAAACAAAACTGGTTCTAAATTTAGTTCCCATATGGCTAACATCATTAACAGTTGGAGTATGTCTGGCTCAAGGCACAACATTGTTTGTGAAACAAGCAGCTGCAACGAACCTAAAGATAAGTGAGAAGTTCAAAATCCCAGCAGCTTCCATGGGCTCTGTTTCCGCGGTTGGTACCTTAATTGCTGTCCCAATATATGATAGGATTATTGTTCCAATTCTTCGGAAAGTGACCGGTAATGAAAGAGGTATGAGCATCCTTAAGAGGATCAGCATCGGCATGGCATCATCTGTGATTGTGATGGTTGTTGCTGCCTTAGTAGAAGCAAAGAGACTAAGAATGGCTGGTAGCCACCATACTATGAGTGTGTTGTGGTTGATACCCCAATACTTGATCCTTGGGCTTGGAGATTCATTTTCCCTGGTTGGTTTGCAAGAGTACTTCTATGAGGAAGTTCCTGACTCCATGAGAAGCTTAGGAATGGCTCTGTTTCTCAGTGTGCTTGGAGTAGGATTCTTCTTAAGCAGTTTTCTGATAACAATAGTGGACAATGTGACGGGGAAGAATGGTGAAAGTTGGATAGGGAAGGACATAAATTCAAGTCGTCTAGATAGGTTTTATTGGACTTTGCAAGAAATGGAGAAGGGAAAGGAAAGTGAAGAAAAATGGGTGCATGATGCATCTGTCGACTATAAAGGCAGAGTTCCTCTCCGTGCTTCCACTGGTGTCTGGAAAGCCTCCTTCTTTGTCCTCGCAATTGAATTCAGTGAAAGATTGAGTTACTTTGGAATAGCCAACAATCTCATCTCGTACCTTACAAAAGTGATGCATGAAGACCTCAAAACAGCAGCCAAGAATGTAAACTACTGGGCAGGAACCACAACCCTAATGCCTCTGGTTGGGGGATTTATCGCTGATGCTTACACCGGTCGATTTGTTATGGTTCTGTTCTCCGCTTTTGTATACCTCATGGGATTAAGCCTGTTGACGATGTCTCAATTCATCCCAAGTATAAAGGCTTGCAACACTAAGATATGCCAACAACCAAGGAAGATTCACGAAGTGGTTTTCTTCCTTTCCCTTTACTGTATCTCCTTGGGCACAGGAGGATACAAACCATGCTTAGAAAGCTTTGGAGCTGATCAATTTGATGATGATCACTTGGAAGAAAGGAAGAAAAAGATGTCTTTCTTCAACTGGTGGAACTTTGCACTGTGCTTTGCGTTGCTGCTTGGTGCAACAGTGGTTGTTTATGTTCAAGACTTTGTCAGCTGGGGAGTAGCTTGCCTAGCCATTACTATTATTATGGCTATCACTATCATAGCTTTTTGTGTGGGAAAATCATTTTACAGGTACAGAAGGACAGAAGGAAACCCTTTTACACCAATTTTGCAAGTCTTAATTGCTGCAGTGAGGAAGAGAAATTTATCTTGCCCTTCAAATCCTGCTTTATTGTATGAGGTCCCAGAGTCAGAGAGGTCCCACGGAAGGCTTCTAAAACACACCAGCAGGCTCAGGTTTCTTGACAAAGCTGCAATAATTGAAGATAAACATGCCGGGCGGAAGGAGAGTCCATGGAGATTAGTGACAGTGACAAGAGTCGAAGAAACAAAACTTGTTCTAAATTTAGTTCCCATATGGCTAACATCATTAACAGTTGGAATATGCGTGGCTCAAGGCACAACATTGTTTGTGAAACAAGCAGCTGCTACGAACCTAAAGATAACTGAGAAGTTCAAAATCCCAGCAGCTTCCATGGGCTCTTTTTCAGCAATTGCTATCTTAATTGCTGTCCCAATATATGATAGGATTGTTGTTCGAATTCTTCGGAAAGTGACTGGTAATGAAAGAGGCATCAACATCCTTAAGAGGATCAGCATCGGCATGACATTATGTGTGGTGCTGATGGTTGTTGCTGCCTTAGTCGAAGCAAAGAGACTAAGAATGGCTGCTAGCCACCAAACTATGAGCGTGTTGTGGTTGATACCCCAATACTTAATCCTTGGGCTTGGAGATTCATTTTCCATAGTTGGTTTGCAAGAGTACTTCTATGAGGAAGTTCCTGATTCCATGAGAAGCTTAGGAATGGCTTTGTATCTGAGTGTGCTTGGAGTTGGATTCTTCTTAAGCAGTTTTCTAATAATCGTGGTGGATCATGTGACGGGGAAGAATGGTGAAAGTTGGATAGGGAAGGACATAAATTCAAGTCGTCTAGATAAGTTTTATTGGATGTTGGGTGTCATAAACGCTTTGGTTTTGTGTTTGTTCATGTTGGTCACAAAAAGGTACACTTACAAGACAATAGAGAGGAGAGGCATGGACAAAGACTGTCATAAGATTGATGAGGTGGAGATGGTGGGTTGA 3345 0.4233 MEQEMEKGKESEEKWVHDASVDYKGRVPLRASTGVWKASFFVLAIEFSERLSYFGIANNLISYLTKVMHEDLKTAAKNVNYWSGTTTLMPLVGGFIADAYTGRFYMVLFSAFVYLMGLSLLTMSQFIPSIKACNSRICQQPRKIHEVVFFLSLYCISVGTGGYKPCLESFGADQFDDDNLEERKKKMSFFNWWYFSLCFALLLSATVVVYVQDFVSWGVACLAITIIMVITVIAFCVGKPFYRYRRTEGNPLTPILQVLVAAVRKRNLSLPSNPALLYEVPESKRSQGRLLKHTSRLRFLDKAAIIEDKHAGRKESPWRLVTVTRVEETKLVLNLVPIWLTSLTVGVCLAQGTTLFVKQAAATNLKISEKFKIPAASMGSVSAVGTLIAVPIYDRIIVPILRKVTGNERGMSILKRISIGMASSVIVMVVAALVEAKRLRMAGSHHTMSVLWLIPQYLILGLGDSFSLVGLQEYFYEEVPDSMRSLGMALFLSVLGVGFFLSSFLITIVDNVTGKNGESWIGKDINSSRLDRFYWTLQEMEKGKESEEKWVHDASVDYKGRVPLRASTGVWKASFFVLAIEFSERLSYFGIANNLISYLTKVMHEDLKTAAKNVNYWAGTTTLMPLVGGFIADAYTGRFVMVLFSAFVYLMGLSLLTMSQFIPSIKACNTKICQQPRKIHEVVFFLSLYCISLGTGGYKPCLESFGADQFDDDHLEERKKKMSFFNWWNFALCFALLLGATVVVYVQDFVSWGVACLAITIIMAITIIAFCVGKSFYRYRRTEGNPFTPILQVLIAAVRKRNLSCPSNPALLYEVPESERSHGRLLKHTSRLRFLDKAAIIEDKHAGRKESPWRLVTVTRVEETKLVLNLVPIWLTSLTVGICVAQGTTLFVKQAAATNLKITEKFKIPAASMGSFSAIAILIAVPIYDRIVVRILRKVTGNERGINILKRISIGMTLCVVLMVVAALVEAKRLRMAASHQTMSVLWLIPQYLILGLGDSFSIVGLQEYFYEEVPDSMRSLGMALYLSVLGVGFFLSSFLIIVVDHVTGKNGESWIGKDINSSRLDKFYWMLGVINALVLCLFMLVTKRYTYKTIERRGMDKDCHKIDEVEMVG 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03140 1114 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 569 1092 - -
Viun1g03140 1114 SUPERFAMILY MFS general substrate transporter 567 1096 IPR036259 -
Viun1g03140 1114 Pfam POT family 640 1050 IPR000109 GO:0016020|GO:0022857|GO:0055085
Viun1g03140 1114 Pfam POT family 106 516 IPR000109 GO:0016020|GO:0022857|GO:0055085
Viun1g03140 1114 SUPERFAMILY MFS general substrate transporter 32 514 IPR036259 -
Viun1g03140 1114 Gene3D MFS general substrate transporter like domains 7 539 IPR036259 -
Viun1g03140 1114 Gene3D MFS general substrate transporter like domains 542 1098 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03140 Viun-Chr1 39539104 39546580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03140 1 540 Organic Solute Cotransporters AT3G53960 54.364 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03140 K26562 K14638 gmx:102670061 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03140 1 39539104 39546580 Viun1g03140 1 39539104 39546580 ECH