Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03122 ATGAGTACGCATAGTATGTTGGATACTGCTTTAAATGATATACTTCAGGTGGTCACACCATTACAAGAAGATTGGCAGATACGATTTTCAATTATTAACGATTTAAGAAGCATTGTTGAATCTGTGGAAAGCTTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTCTTCACCCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAAATTTATTGGGGGAAGTTTTAAAAGCTTTGAGAATGAAAGGTGTAGGGAGCCACTTGCAGTTCATCCCCAATGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCGTCAGGGTATATCTTGTGACATTTCAATTAATAACTTGCCAGGCCAAATGAAATCCAAGATTTTGCTTTGGATGAACAAGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACACAAAATCAATAACTCTAAAACTGGAACTTTCAACTCCTATTCCCTAAGTCTACTTGTCATATTTCATTTTCAGACATGTGTTCCTGCAATCTTACCACCACTCAAATATATATACCCTGGCAACATGGCTGATGATCTTAAAGGGGTTAGAGCTGATGCCGAGAATCATATTGCAGAAACATGTAATGCTAGTATAAACGAGCACATATCAAACAAGGCAAGGTCAATTAACAAAAAATCCGTGCCTGATCTTTTTGTTGAATTCTTACGAAAGTATGCTCAGATGGATTCATGGGCCTCGAATTTGGGAATTTGCCCGTACACTGGACAATGGGAGCAGATAGAGAACAACACGATTTGGTTACCCAAGACTTACTCTATATTTGTTGAGGATCCCTTTGAGCAGCCGCAAAATACTGCAAGATCTGTCAGTGCAGGACAACTGAAGAAGATAAGCGAGGCCTTTTCAAAATCATACTCCTTTCTTTCTTCGAACAATCATAATTTAAATTCACTTTTGACCATGTTAGCACCACCACATGTAGTAAAATCTATCACAGGTATCCAAAATTACAACGGAAGTTACTTTCACCCAACTCAGCCAAAAGTACAGAGAGTGATGCGCCCTCCACCGCAGTCACAACATCATTTTCAATATGGCAGTCCAGGAACAAGCTCCAACAGTTCAGCTTCAAATGGACATATGCAGATGCCTAGAGGAACAAACTTTAGCATTCCATCTTCAAATGGGTATACACAGATGCCTAGAGGAACAAGCTTCAACATTCCATCTTCTTATGGGCATATACCAATGCCTAGAGGAACAAGCTTCAACATTCCACCTTCAAACGGTCATATACAGATGCCTAGAGGAGCAAGTATGAGCAGTTCATCTTCAAATGGGCATATACAGAACCCTAGAGGAACTAAGAAGCCTAGAGGAACCAACTTCAACATTGCATCTTCAAATGGGCATGTACCGGTGAATAAAGGCCAGCAGATGTGGAGGCCAAAGAGTTAA 1527 0.3995 MSTHSMLDTALNDILQVVTPLQEDWQIRFSIINDLRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQNLLGEVLKALRMKGVGSHLQFIPNARVPILKFKSNRQGISCDISINNLPGQMKSKILLWMNKIDGRFHDMVLLVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKYIYPGNMADDLKGVRADAENHIAETCNASINEHISNKARSINKKSVPDLFVEFLRKYAQMDSWASNLGICPYTGQWEQIENNTIWLPKTYSIFVEDPFEQPQNTARSVSAGQLKKISEAFSKSYSFLSSNNHNLNSLLTMLAPPHVVKSITGIQNYNGSYFHPTQPKVQRVMRPPPQSQHHFQYGSPGTSSNSSASNGHMQMPRGTNFSIPSSNGYTQMPRGTSFNIPSSYGHIPMPRGTSFNIPPSNGHIQMPRGASMSSSSSNGHIQNPRGTKKPRGTNFNIASSNGHVPVNKGQQMWRPKS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03122 508 CDD NT_PAP_TUTase 27 147 - -
Viun1g03122 508 MobiDBLite consensus disorder prediction 445 498 - -
Viun1g03122 508 PANTHER POLY A POLYMERASE CID PAP -RELATED 5 439 - -
Viun1g03122 508 MobiDBLite consensus disorder prediction 383 434 - -
Viun1g03122 508 MobiDBLite consensus disorder prediction 375 508 - -
Viun1g03122 508 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 342 - -
Viun1g03122 508 Gene3D - 152 328 - -
Viun1g03122 508 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
Viun1g03122 508 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Viun1g03122 508 Pfam Nucleotidyltransferase domain 36 91 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03122 Viun-Chr1 39439143 39447084 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03122 - - vum:124831893 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03122 1 39439143 39447084 Viun1g03122 1 39439143 39447084 ECH