Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03113 ATGCAAATGCAAACTGGTGTTAATGTGGTAGAGGATCAATATGAGCAATGTGAGGCTGGATATCCAAACAAAACTGCTATAGCATGCATGATAAATGCAGAGATTAGTGCTGTGTTGGCAGTTATGCGAAGAAATGTTAGATGGGGAATTCATTACATTTCAGATGATGATCAATCCGAGCACTTCCTTGTTCAGTCATTAAAGACGTTGAGGAGGCAAATTTTCTCATGGCAGAATCAATGGCGTGCCATCAACCCTGCCTTGTATCTCCAGCCTTTTTTGGATGTGATACGATCAGATGAAACTAGTGCGCCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAAATCTTAACTCTAGATGTGATTGATAAGCATACTGTCAACGTTGGGGATACCATGCACTTGGTGGTTGATTCCGTCACTAGTTGCAGATTTGAAGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTGCAAGTTCTTCTAGCTTGTGTTAAAGGTAAAGCATCTGTAATGCTGAGTAACCAACACGTTTGCACCATAGTGAACACTTGTTTCCGAATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTCCAACGAATAGCACGGTACACAATGCATGAACTGGTTAGGTCTATATTTTCTCACCTTCAGAACTTTGACAACACAAAGTGTGGATTCATAAATGGGAGCGCTACCTTAAAGCAAGTGACCAATGGACTAAATAATGACCATGCTTTGGCAAGCAGAAAATTGGAAAATGAGAGGCTTAATTCTGCACGTGATGCTCAACCATTGTCTACAATCATTGCTTCCGGTGCTGCACCTGTTGGGGCAGCAAATGCAGTGGATGAAAACACAGCTATTGCTAGCAGTGGCAATGAAACTGATCCACACGAATTACTGCTCATGACTGATGGGGTTCCCTGTATAGTGGAAATATTTCACTTCTTGTGTTCTTTGCTGAATGTCACTGAGCATATGGGAGTGAATCCTAGATCAAACACAATGACATTTGATGAAGATGTGCCTCTTTTTTCATTAACTTTGATTAATTCGGCCATAGAGTTGGGAGGGCCATCCTTCCGCCATCATCCAAGACTGCTGTGTTTAATCCAGGATGAATTATTCTTCAATCTTATGCAATATGGTTTATCAATGAGCCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTGTATCAACATCTTCGTCAAGAACTCAAGTTACAGCTAGAAGCATTTTTTTCTTGCGTAATTTTGAGGCTTGCACAAAGCAAATATGGTGCATCATATCAGCAACAAGAGGTTGTGATGGAAGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTACGCCAACTTTGACTGTGACATAAGTTGCAGTGATGTCTTCGAAGATATTGTTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAATCCATTATCTTCCATGCACATTCTTTCCTTAGATGGTCTTATTGCTGTAATGCAGGGAATTTCCGAAAGAATAGGTAGTGAATCTTTAAGTTCAGAACAATCTCCTGTGAATTTTGAGGAGTATACACCATTCTGGATGGAAAAGTGTGACAGTTTTGATGACCCAAATGATTGGGTTCCTTTTGTCTGCCGAAGAAAGTACATAAAGAGAAAATTAATGATTGGAGCTGATCACTTCAATCGGGATATTAAGAAAGGTCTAGAGTTTCTCCAAGGAGAACATCTTTTGCCTAACAAACCTGATTCCGAAAGTGTTGCCTGCTTTTTAAGATACACAGCTGGGTTAGATAAGAATTTCATTGGTGATTTCCTTGGAGATCATGATGAATTCTACATTCAGGTTCTTCATGAATTTGCTAAGACATTTGTTTTCCATGATATGACCTTAGACACAGCCCTACGTGTATTTTTGGAGACTTTTAGGCTTCCTGGAGAATCACAGAAGATACACAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCAGATATCCTAGCTAACAAGGATGCTGCTCTCGTGTTATCATACTCAATTATATTGCTTAATACAGATCATCATAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCTTATAAATGATGGCAATGATCTACCTCGAGAATTTCTGTCAGAGATTTATCATTCAATTTGTAAGAATGAAATTCGTACCACTCTTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGCACGAGGCAAATAAAACTTCTCCATACATTGTCTCGGATTCCCGTGCATACTTAGATTATGATATGTTTGTGTTGCTGTCGGGTCCAACAATTGCTGCCATTTCTGTGGTTTTTGATAATGCTGAAAGTAAAGAGGTATATCAAAGATGTATGGATGGATTCTTAGTTGCTGCTAAGATATCAGCCCACTATCATCTTGAAAATGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCATTACCATTTTGGATCCATTATCAGTTGATGATTCTGTCCTGGCCTTGGGAGATGACACAAAAGTAAGAATTGCAACTGAGACAGTTTTCACTATTGCAAATAGTTATGGTGATTACATCCGCACAGGGTGGAGGAATATTCTTGATTGTATTTTAATATTTTACAAGTTAGGCCTCCTTCCTCCTCACTTGGCCAGTGATGCAGCTGACGAGTCACGGATAACTACAGAAATTGGACATGGAAAATATAACTCATATTCTTTAGTTTCATCTAATTTTCAATATATTCCTCCAAAGAGATCCTCAGGATTAATTAGTAGGTTTAGTCAACTCTTATCACTTGGTTCTGAAGAGATACAATCAATACCGACAAAAGAACAGCTGGTTGCTCATGAGCAAGCTACACAAGCAATTCAGAAGTGTCACATTGATAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGAATCTTGAAAGAGCACTCATCAATGCTGGATCTCAACATCTGAAAGGAAACAGAATACTTGAGGATGAAGAGTCTTCGGTTTTCTGCCTGGAGTTATTGGTGGCAATTACTCTGAATAACAGGGACAGAGTTGTACTTCTTTGGACGGGTGTTTATGAACACATATCCAATATTATTCAGTCAACTGTGATACCTTGTGCTCTGGTAGAAAAGGCTATTTTTGGACTTCTTAGAATTTGCCACCGCTTACTTCCCTACAAAGACAACATTACTGATGAACTTTTGAGGTCCCTGCAACTTGTCTTGAAGCTTGACGCACTAGTTGCAGATGCGTACTATGAGCAAATTACAAAGGAAGTCGGTTACCTTGTGAGGGCAAATGCTTCTCATATTAGATCTCAGTCTGGATGGTGGACTATTATAGCTCTGCTCTCAATCACTTCTAGACACCTGGAATCATCTGAGGCTGGATTTGATGCGCTGCTGTTCATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTACTTTCTCTGTGTAGATGCTGCGAGACAGTTTGCCGAGTCTCGTGTGGGACCGGTAGATCGATCTATAATTGCACTAGATCTTATGGCAAGTTCTGTGAATTCCTTAGAAAAATGGTTGAATAATGCTAAGAAAGCTGCAAAACAACAGGAAGTGGAAAAGATGTTGCAGGATATTGGGGAGATGTGGTTTAGGCTAGTGCAGGGACTGGGGAAAGTATCTTTGGACCAGAGAGAGGAGGTTAGAAATCATGCATTGTTATCTTTACAGAAGTGCTTGAAAGGAACTGTTGGGACTCACCTCCCACGTGATTTGTGGTTGACATGTTTTGATCAAGTGATCTTCACTGTGCTCGAAGACCTGCTTGAAATTGCGCAGTCACATTCTCAAAAGATCTACCCAAATATAGAAGGAACACTTGTTATTGCCTTGAAGCTTATGTCTGAAATTTTCCTCCAGTTACTCCTAGAACTATCACAATTGGTGGCCTTCTGCAAACTATGGGAGGGTATGCTAAGCTGTATGAAAAAATGTGTGAAGATGAAAATTAAAGGAAGAAGAAGTGAGAAGCTTCAAGAGCTTGTGCCTGAGCTTCTGAAGTACATTTTGCTTGTTATGAAATCTGCGGACATACTAGTGGAGATTAATAATGGTTCGGGAGAAAATAGTTTGTGGGAGCTGACATGGCTACATATGAAGAATATTGCTCCCTCATTGCAATCTGAGGTGTTTCCTGAGCAAGATACGGAGCAGCTACAGCACAGACAGGTTAAAGCAGTTGAAAGTTTGGGATCTGATGCAAACATTTCTGATCCTTCAAATGAAAAAGAGGGCAAAGATGGAGTTGAGATCAGTTTATTCTAG 4404 0.3985 MQMQTGVNVVEDQYEQCEAGYPNKTAIACMINAEISAVLAVMRRNVRWGIHYISDDDQSEHFLVQSLKTLRRQIFSWQNQWRAINPALYLQPFLDVIRSDETSAPITGVALSSVYKILTLDVIDKHTVNVGDTMHLVVDSVTSCRFEVTDPGSEEVVLMKILQVLLACVKGKASVMLSNQHVCTIVNTCFRIVHQAGTKGELFQRIARYTMHELVRSIFSHLQNFDNTKCGFINGSATLKQVTNGLNNDHALASRKLENERLNSARDAQPLSTIIASGAAPVGAANAVDENTAIASSGNETDPHELLLMTDGVPCIVEIFHFLCSLLNVTEHMGVNPRSNTMTFDEDVPLFSLTLINSAIELGGPSFRHHPRLLCLIQDELFFNLMQYGLSMSPLVLSMVCSIVLNLYQHLRQELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDISCSDVFEDIVNLLSKSAFPVNNPLSSMHILSLDGLIAVMQGISERIGSESLSSEQSPVNFEEYTPFWMEKCDSFDDPNDWVPFVCRRKYIKRKLMIGADHFNRDIKKGLEFLQGEHLLPNKPDSESVACFLRYTAGLDKNFIGDFLGDHDEFYIQVLHEFAKTFVFHDMTLDTALRVFLETFRLPGESQKIHRVLEAFSERYYEQSPDILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRLINDGNDLPREFLSEIYHSICKNEIRTTLEPGFGFPEMTPSRWISLMHEANKTSPYIVSDSRAYLDYDMFVLLSGPTIAAISVVFDNAESKEVYQRCMDGFLVAAKISAHYHLENVLDDLVVCLCKFITILDPLSVDDSVLALGDDTKVRIATETVFTIANSYGDYIRTGWRNILDCILIFYKLGLLPPHLASDAADESRITTEIGHGKYNSYSLVSSNFQYIPPKRSSGLISRFSQLLSLGSEEIQSIPTKEQLVAHEQATQAIQKCHIDSIFTESKFLQAESLLNLERALINAGSQHLKGNRILEDEESSVFCLELLVAITLNNRDRVVLLWTGVYEHISNIIQSTVIPCALVEKAIFGLLRICHRLLPYKDNITDELLRSLQLVLKLDALVADAYYEQITKEVGYLVRANASHIRSQSGWWTIIALLSITSRHLESSEAGFDALLFIMSDGAHLLPANYFLCVDAARQFAESRVGPVDRSIIALDLMASSVNSLEKWLNNAKKAAKQQEVEKMLQDIGEMWFRLVQGLGKVSLDQREEVRNHALLSLQKCLKGTVGTHLPRDLWLTCFDQVIFTVLEDLLEIAQSHSQKIYPNIEGTLVIALKLMSEIFLQLLLELSQLVAFCKLWEGMLSCMKKCVKMKIKGRRSEKLQELVPELLKYILLVMKSADILVEINNGSGENSLWELTWLHMKNIAPSLQSEVFPEQDTEQLQHRQVKAVESLGSDANISDPSNEKEGKDGVEISLF 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03113 1467 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 314 475 IPR032691 -
Viun1g03113 1467 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 70 1428 - -
Viun1g03113 1467 CDD Sec7 561 744 IPR000904 GO:0005085|GO:0032012
Viun1g03113 1467 SMART sec7_5 557 744 IPR000904 GO:0005085|GO:0032012
Viun1g03113 1467 MobiDBLite consensus disorder prediction 1452 1467 - -
Viun1g03113 1467 Pfam Sec7 domain 561 744 IPR000904 GO:0005085|GO:0032012
Viun1g03113 1467 Coils Coil 1213 1233 - -
Viun1g03113 1467 Gene3D - 637 751 IPR023394 -
Viun1g03113 1467 SUPERFAMILY Sec7 domain 557 747 IPR035999 GO:0005085|GO:0032012
Viun1g03113 1467 ProSiteProfiles SEC7 domain profile. 553 742 IPR000904 GO:0005085|GO:0032012
Viun1g03113 1467 MobiDBLite consensus disorder prediction 1442 1467 - -
Viun1g03113 1467 FunFam ARF guanine-nucleotide exchange factor GNOM-like 636 754 - -
Viun1g03113 1467 Gene3D - 554 636 - -
Viun1g03113 1467 FunFam ARF guanine-nucleotide exchange factor GNOM 554 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03113 Viun-Chr1 39383252 39390021 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03113 K18443 - gmx:100802024 2430.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02216 8 32374451 32383282 Viun1g03113 1 39383252 39390021 PCT