Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03104 ATGGGCCCATATGGACATCAGCACCCCAAATATCTAACATTGTCGATTCCGCACAAGATAAAAACACTTTTCTTTATCTTCATGGTCAGAAATCACCAAGATACGCAAACAACAATGGCGAACCCAGAGGGTAGTGGCAGAGCTTCAAGATGGTCACTTAAGGGAACCACTGCTCTCGTTACTGGAGGCACTCGTGGAATCGGGCATGCTGTGGTGGAGGAACTGGCAGAGTTTGGTGCCAATGTGTACACTTGTTCCAGGAATGAAGAGGAGCTGAATGCACGTTTAAAGGAATGGAAAGAGAAGGGGTTTTCGGTTTCTGGTTCGGTTTGTGATGCGTCTTCTCCAGCCCAAAGAGAGAGCCTCATTAAACAAGTGGCCTCTGCCTTCAACGGCACGCTCAACATACTTGTGAATAATGTTGGAACAAATGTGAGGAAGCCAACAATAGAGTATACAACCGAAGAATATTCAAAATTGATGGCAACTAACTTGGAATCTGCATACCATCTGAGCCAACTTGCACATCCTCTTCTTAAAGCATCTGAAAATGGAAGTGTTGTGTTCATTTCCTCCGTTGCAGGTCAGAGAAGTGTAGGTTCTGGAGCCATTTATGCAGCAACTAAAGCTGCAATTGATCAGTTTACCAAGTATCTTGCATGTGAGTGGGCCAAAGACAATATAAGGAGCAACAGTGTTGCACCCTGGTATACCAAAACACCACTTGCAGAACCTGTGCTTGCAAATAAGGAAATTGTTAACGAGATAATATCTCGAACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTGTCATCCTTGGTGACTTTCCTTTGCTTGCCAGCAGCTTCTTACATCACTGGACAAGTTATTTGTGTTGATGGAGGATTTACAGTGAATGGATTTCAACCTAGCGTGAGAATTACTTAA 930 0.4376 MGPYGHQHPKYLTLSIPHKIKTLFFIFMVRNHQDTQTTMANPEGSGRASRWSLKGTTALVTGGTRGIGHAVVEELAEFGANVYTCSRNEEELNARLKEWKEKGFSVSGSVCDASSPAQRESLIKQVASAFNGTLNILVNNVGTNVRKPTIEYTTEEYSKLMATNLESAYHLSQLAHPLLKASENGSVVFISSVAGQRSVGSGAIYAATKAAIDQFTKYLACEWAKDNIRSNSVAPWYTKTPLAEPVLANKEIVNEIISRTPIKRIAEAHEVSSLVTFLCLPAASYITGQVICVDGGFTVNGFQPSVRIT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 179 195 IPR002347 -
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 205 224 IPR002347 -
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 132 143 IPR002347 -
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 57 74 IPR002347 -
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 261 281 IPR002347 -
Viun1g03104 309 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Viun1g03104 309 PANTHER TROPINONE REDUCTASE 50 301 IPR045000 GO:0016491
Viun1g03104 309 Gene3D - 46 301 - -
Viun1g03104 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 300 IPR036291 -
Viun1g03104 309 FunFam Short-chain dehydrogenase reductase 39 303 - -
Viun1g03104 309 Pfam Enoyl-(Acyl carrier protein) reductase 64 298 - -
Viun1g03104 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 IPR002347 -
Viun1g03104 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 IPR002347 -
Viun1g03104 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03104 Viun-Chr1 39345923 39348986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03104 50 304 Miscellaneous Gene Families AT2G29290 63.424 1.13e-119 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03104 K08081 - gmx:100819646 466.077