Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03096 ATGGAGGAACCAAACTCTTGTTTCTTCAACCCTGCAATTTTGGATTCCCTATCTGAGGATTCTCTTCACGAAATCATCGGCAGCTACAATGGCTTCTGCGACGCAACGCAATCCCTTCTCACCGGGAACGGCGATCTCTCCGTCGGTCCCGACTTCGTTTCTCACGTTCACGCCCTCTGCAAACACCGTCTCCATTCCCTCGTTCAAGACCACTTTCTTCGAGTCCTCGAGGAGACTTTTGAACGAAATGGGGCATCAAGATTTTGGCGCCATTTTGATCCCTACTCTCATGTTGCGGGTTTGAACAAGAATGATGATCTTGATATTGACGAGGATGAAATTCAGAATGTGTTGTATAATGCTTTGGAAGAGGTTACTTTGGAGAAACAGTATCAGGAGAAGTGTCTTTTGATGTTGGTGCATGGTTTGCAATCTTACCAGGACCAGATGTTAGAGGATAAACATGATTTTGAAGGAGAAAGAAATTACCTTACTTCTAAGTATCAATGGATTGTCTCTTCTGTTCTTATGGCCACACTTCCTCGGCATTTCCCCGTTATACTGCATTGGTATTTTAAAAGAAAACTGGAGGAGTTAAGTACGATCATGGATGAAGAGTTCTGTGATGATGCATCTCAAAATAAGGATGGCATGGATTTAGATGAAAAAGGAAAAGTATGCAACAAGGTTGGTGAAATGGATGTTGATGAGTGCTATAACGACCATAGGTTCTCGGAAAACAGTAGACTGGTGAAGAACATTGGAAAGGTTGTTCTTGATCTTAGAAATCTTGGATTTACTTCCATGGCGGAGGATGCTTATGCTTCTGCTATATTTTTACTACTGAAGGCAAAAGTAAATGATGTAGCTGGTGATGATTATCGAAGTTCTGTTTTACAATCTATTAAAAGCTGGATACAGGCTGTTCCTCTCCAATTTCTGCATGCACTTCTTGTCTATCTTGGTGATGTAGTTAGTTATGAGAGTACTTCATCAGGTTTGAAATCACCTTTAGCGCCACAGCCATCTTCGTGCTGTCCTGGAATTAATACTCCCTCTGAAGGGCTAGTGAGATGGAAGTTGCGGCTGGAATATTTTGCATATGAAACATTGCAAGATTTAAGAATAGCTAAATTATTCGAGATCATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAACTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAATCGTTTATTTCAGCACTGCGATATCGCTTGCTTACTGCAGGCGCATCAACCAATGATATTTTACACCAATATGTTTCAACAATTAAAGCACTTAGGACAATAGATCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCCATAAGGGATTATTTAAGAGGAAGGAGGGATACCATAAAGTGCATAGTAACAATGCTGACAGATGGAACTGGTGGAAATTCAAGTTCCTCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAGGAAATTCAAGAGAATGCTGGTGTTGATGATGATTTTAACAGTGATGATAGGCAAGCATGGACCAATGCCATGCGATGGCAACCTGACCCTGTGGAAGCAGACCCATTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGGATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTGAGAAACTTCTAAATAAATCAGATTATGATATTGATTCAGAGATACGTACTCTAGAACTCCTGAAGATACACTTTGGAGAGAGCAGCCTACAGAAATGTGAGATTATGCTCAATGACCTAATTGGCTCAAAGCGAACCAACAGTATCATTAAAGCTACCATAAATCAGCTGCCTCAGACAAGTACTGAAGTGGGAGACAGTGCAATATCCATGGATGTAATTTCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAGCCACTTAACCTGCCTGAACCTGTTGACCAGCTCCTATCTGATTATGCAAAGAGATTTAGTGAAATCAAAACTCCTCGCAAGCTTCAGTGGAAAAAAAGTCTTGGAACCATCAAGTTGGAGTTGCAGTTTCAAGATAGGGAAATGCAATTCACAGTAGCCCCTGTTCACGCATGTATCATTATGAAATTTCAAGATCAACCAAGTTGGACTGCTAAAGACCTTGCTGCCGCTATTGGGATACCTGCAGATGCTTTAAATCGGAGAATAAATTTCTGGATAAGCAAGGGGATCATTACAGAGTCGCAAGGGGAAAATTCCTCTGACCATGTATACACCATTGTGGAAAATATGGCTGAGACAAGTAAGAATGGAGCCAGTGCTGGTACTCAGGAACTTCTTGGAGGTGACGAGGAGGAGGACAGATCTGTGGCCTCTGTAGAAAATCAACTTCTTAAGGAAATGACTGTATATGAGAAATTTATCATGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCTGATCCCCCATATGACAAATCACTCCAGCAACTACAAAGCTTTTTATCTGGTCTGGTCTCTGAGGAGAAGTTAGAACTTCGGGATGGAATGTACTTTCTAAAGAAGTAG 2655 0.4121 MEEPNSCFFNPAILDSLSEDSLHEIIGSYNGFCDATQSLLTGNGDLSVGPDFVSHVHALCKHRLHSLVQDHFLRVLEETFERNGASRFWRHFDPYSHVAGLNKNDDLDIDEDEIQNVLYNALEEVTLEKQYQEKCLLMLVHGLQSYQDQMLEDKHDFEGERNYLTSKYQWIVSSVLMATLPRHFPVILHWYFKRKLEELSTIMDEEFCDDASQNKDGMDLDEKGKVCNKVGEMDVDECYNDHRFSENSRLVKNIGKVVLDLRNLGFTSMAEDAYASAIFLLLKAKVNDVAGDDYRSSVLQSIKSWIQAVPLQFLHALLVYLGDVVSYESTSSGLKSPLAPQPSSCCPGINTPSEGLVRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSSSGNPGDSLLEELNRDEEIQENAGVDDDFNSDDRQAWTNAMRWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSIIKATINQLPQTSTEVGDSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFSEIKTPRKLQWKKSLGTIKLELQFQDREMQFTVAPVHACIIMKFQDQPSWTAKDLAAAIGIPADALNRRINFWISKGIITESQGENSSDHVYTIVENMAETSKNGASAGTQELLGGDEEEDRSVASVENQLLKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03096 884 Pfam Cullin family 547 756 IPR001373 GO:0006511|GO:0031625
Viun1g03096 884 SMART APC2_2 823 882 IPR014786 -
Viun1g03096 884 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 24 883 IPR044554 -
Viun1g03096 884 FunFam Anaphase-promoting complex subunit 2 799 884 - -
Viun1g03096 884 Pfam Anaphase promoting complex (APC) subunit 2 823 880 IPR014786 -
Viun1g03096 884 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
Viun1g03096 884 SMART cul_2 549 706 IPR016158 -
Viun1g03096 884 Gene3D - 799 884 IPR036388 -
Viun1g03096 884 SUPERFAMILY Cullin homology domain 526 779 IPR036317 -
Viun1g03096 884 SUPERFAMILY "Winged helix" DNA-binding domain 813 883 IPR036390 -
Viun1g03096 884 Gene3D Cullin Repeats 523 629 - -
Viun1g03096 884 FunFam Anaphase-promoting complex subunit 2 517 630 - -
Viun1g03096 884 FunFam Anaphase-promoting complex subunit 2 646 790 - -
Viun1g03096 884 Gene3D Cullin; Chain C, Domain 2 644 786 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03096 K03349 - gmx:100785428 1618.98