Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03055 ATGAAATACGAGAACATGGTACTCAATTCATTCAAGAACAAAGTAACTTCAGTTTTCAGTAGAGTTCCATGGGGAAGTAACAATCACTTCATAATGGAAATAAGTATTGCAAGGCCTCATCTTGAAACACGGGGAGTATTCTTTTCAAATATTTCAAGAACAATAGCATGGGAAAGCTCTAAGAAACCTCCATGTACTGTGGCTGCCTTAAGTTCTACACAGGACTTTCACAGACTGGCCTCTTCCTGTCAAGCTTTTACTTCTGTGAATCCTAAAAGGCATTTAATCTGTAGACCAAACTCCATGCCGACTAGTTTACAGGAATCTGCATCTAATGGAGATAATTCGCTTGAAGGTGAGAATCCACCTATAGACTCAGAAGTGGAGACTTTGGCACAACCACCTACCCGTGAACAGATAATGGCACTGCTTGCTGACGCACAGAGAGAAAAACTCACTAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGATTCCTAAAAAGACAGTTGAACGTAAAGGAGGATGCATTGGTTAAATTCAAAAGTGAACTTGGTGTCATGGAGCTTGAAATTCAGGCTTTAGCTAGACTAGCAGAAGAAATAGCTCAATCCGGTATTCCAGAAGGTTCGAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCTAGATTAGAAGCCGTACATGACCAACTGAAGGAACAAATAAAGGATGTCGATGCGGCACAATCAAAGAAGGTTTCCGTGTTTTGGATTGGCATGGCTGAGAGCGTGCAAGTTATGGGATCCTTTGATGGCTGGAGCCAAGGAGAGCACCTTTCACCGGAATATAATGGTTCTTACACGAAGTTTTCAACAACATTGTTGCTCAGGCCAGGAAGGTATGAAATTAAATTCTTAGTAGATGGTGAATGGCAGCTGTCCCCAGAATTCCCCATTATTGGTGAAGGGTTGACGAAAAATAATTTGTTAGTTGTTGAGTAA 987 0.4124 MKYENMVLNSFKNKVTSVFSRVPWGSNNHFIMEISIARPHLETRGVFFSNISRTIAWESSKKPPCTVAALSSTQDFHRLASSCQAFTSVNPKRHLICRPNSMPTSLQESASNGDNSLEGENPPIDSEVETLAQPPTREQIMALLADAQREKLTKKLSEANQQNRFLKRQLNVKEDALVKFKSELGVMELEIQALARLAEEIAQSGIPEGSRKINGKYIHSHLVARLEAVHDQLKEQIKDVDAAQSKKVSVFWIGMAESVQVMGSFDGWSQGEHLSPEYNGSYTKFSTTLLLRPGRYEIKFLVDGEWQLSPEFPIIGEGLTKNNLLVVE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03055 328 Coils Coil 142 176 - -
Viun1g03055 328 CDD E_set_AMPKbeta_like_N 247 327 - -
Viun1g03055 328 MobiDBLite consensus disorder prediction 98 132 - -
Viun1g03055 328 Gene3D Immunoglobulins 238 327 IPR013783 -
Viun1g03055 328 PANTHER PROTEIN PTST, CHLOROPLASTIC 42 328 - -
Viun1g03055 328 FunFam Protein PTST, chloroplastic 240 328 - -
Viun1g03055 328 Coils Coil 223 246 - -
Viun1g03055 328 SUPERFAMILY E set domains 247 327 IPR014756 -
Viun1g03055 328 Pfam Glycogen recognition site of AMP-activated protein kinase 250 324 IPR032640 -
Viun1g03055 328 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03055 Viun-Chr1 38981357 38986984 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03055 - - vra:106758029 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03055 1 38981357 38986984 Viun1g03055 1 38981357 38986984 ECH