Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03048 ATGTCGGCCACGTGCGGGGTGGTGGAGTGTGTCTTCGTGCTGGGCTGCGCTAGGTGGTTCTGGAAGCGCTGTACCTACGTTGGAAGCTACGATAGCGCAACGTGGCCAGCCGCCACCGCCGACGAGTTTGACCCGGTGCCGCGTGTCTGCCGCCTCATCCTCGCCAACTACGATCCCGATCTCCGAAATCCCCAGTACTACAAGCCCGCCCCCGGTCACCGCCTGAACCCGGACTGGGTCGTGAAACGCGTGAACTACGAGGACACGCTGGGTCACGCGCCGCCCTACCTTATCTACCTCGACCACGATCACAAGGAGATCGTGCTGGCGGTGCGTGGCCTCAACCTGGTCAATGAGAGTGACTACAAAGTCCTACTTGATAACCGGTTGGGGCAGCAGATGTTCGACGGCGGGTACGTGCACCGTGGGCTGCTGAAGTCGGCGCAGTGGCTGCTGAATAGGGAGTCGGAGACGCTGAAGCGATTGTGGCTGGAGAATGGTTCCGAATATGATATGGTGTTCGCGGGACACTCTTTGGGTTCTGGGGTGGTGTCGTTGTTGACGATTTTGGTCGTGAACCATAGGGACGGTTTGGGTGGGATTCCAAAAGAGAAGATTCGGTGTTATGCGATTGCTCCTGCCAGGTGTATGTCCCTCAATTTGGCTGTCAAGTATGCCAATGTCATTCATTCTGTTGTTTTGCAGGATGATTTCTTGCCAAGAACGCCCACTCCATTGGAAGATATATTCAAATCTATATTCTGTTTGCCCTGCTTATTGTTGTTGGTTTGCCTGAGAGACACTTTCATACCAGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCGCCTGGACGAATGTACCATATTGTTGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCAGATCATGGAATTATTTGGATTGAAAGGGAGGCCGAGAAAGCCTTGCAATTGATGAAGGGGAAGAGCTCTGAAACTGTTATGACAGAGCCTCCAACGGTGCAAAAGATGGAGAGGTTAAAGACTATAGAGAAAGAACATAGAGATGCTTTGGAAAGGGCTGTTAGCTTAAACGTGCCTCATGCAGTGGACAGTGCTGAGGAAGAAGAGGCGGAGAAGAATGAAGGTGAAGAAGCATCGGAAAGTGGAAACAATAACGTGTCAAAATCGAGTGGTGGAAGGTCGAAGTGGGATGAGGTTGTTGAAAAACTCCTAAAGAAGAGTAAGACAGGAGAACTAAATCAGGAAAGGGATACCAATGTCTTATCATAA 1350 0.503 MSATCGVVECVFVLGCARWFWKRCTYVGSYDSATWPAATADEFDPVPRVCRLILANYDPDLRNPQYYKPAPGHRLNPDWVVKRVNYEDTLGHAPPYLIYLDHDHKEIVLAVRGLNLVNESDYKVLLDNRLGQQMFDGGYVHRGLLKSAQWLLNRESETLKRLWLENGSEYDMVFAGHSLGSGVVSLLTILVVNHRDGLGGIPKEKIRCYAIAPARCMSLNLAVKYANVIHSVVLQDDFLPRTPTPLEDIFKSIFCLPCLLLLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKGKSSETVMTEPPTVQKMERLKTIEKEHRDALERAVSLNVPHAVDSAEEEEAEKNEGEEASESGNNNVSKSSGGRSKWDEVVEKLLKKSKTGELNQERDTNVLS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03048 449 CDD Lipase_3 42 244 - -
Viun1g03048 449 MobiDBLite consensus disorder prediction 421 440 - -
Viun1g03048 449 SUPERFAMILY alpha/beta-Hydrolases 38 246 IPR029058 -
Viun1g03048 449 MobiDBLite consensus disorder prediction 378 449 - -
Viun1g03048 449 Gene3D alpha/beta hydrolase 36 257 IPR029058 -
Viun1g03048 449 Pfam Lipase (class 3) 108 244 IPR002921 GO:0006629
Viun1g03048 449 Pfam Lipase 3 N-terminal region 8 67 IPR005592 GO:0016042
Viun1g03048 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03048 Viun-Chr1 38911714 38915528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03048 1 344 Miscellaneous Gene Families AT5G37710 75.000 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03048 - - gmx:100798831 777.319