Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03028 ATGCATTCAGTGGGGTATCGAGCGAACGCATTGCTGACCTTCGCCGTCACCATTCTGGCTCTTATGTGCGGCATGGCCTCTCTCTCCGACAACTTCAATTCCCCCTCTCCCTCCGCCCATGTCCAGGTCTTGAACATCAACTGGTTTCAGAAACAGCCCAACGCCAATGACGAGGTCAGCATGACATTGAATATATCAGCAGATTTGCAGTCCCTTTTTACATGGAACACAAAACAGGTTTTTGTTTTTCTTGCTGCCGAGTATGAAACTCCTAAGCATTCCTTGAATCAGATATCTTTATGGGATGGTATCATACCCTCTAAAGAGCATGCTAAGTTTTGGATTCATACATCAAATAAGTACCGCTTCATTGACCAGGGAAGCAATTTGCGCGGCAAAGAATATAACCTGACTATTCATTGGCATGTTATGCCTAAGACTGGCAAAATGTTTGCAGATAAAATAGTCATGCCAGGTTTCAGATTGCCAGAGGAATATAGATGA 504 0.4405 MHSVGYRANALLTFAVTILALMCGMASLSDNFNSPSPSAHVQVLNINWFQKQPNANDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKHSLNQISLWDGIIPSKEHAKFWIHTSNKYRFIDQGSNLRGKEYNLTIHWHVMPKTGKMFADKIVMPGFRLPEEYR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03028 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
Viun1g03028 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016020
Viun1g03028 167 Pfam Signal peptidase subunit 1 165 IPR007653 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03028 Viun-Chr1 38766323 38768677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03028 K12948 - gmx:100306631 327.791