Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03027 ATGGCGCTAATCGTTCTCTCTCTCTTCCTCCTCCTCTTCACCTTCCAACTTCCCTTCCGCTCCTCTGGACAATCGAGCTCCATGGAATCAGTTCCCGATCTTCAGAACACTATGTATGCTTCCATCGAAGGATATCCTTGCGTGCGCCTGCTTAATCTATCTGGAAACATCGGTTGTTCTAATCCTGGACGAGATAAGGTTGTGGCTCCTATTGTACGGTTCGGAAATGTTGACAAAATAGCTGAGCCGTCTGCTATACTGGTGTCAGTGGAGGACTTTCCAACTCTCTTTACTAGAATATCAGATGACTCTAGATTTGCTAGTAAAGTCAGTGGTGTACTTGTGGAACCAAGTACTGATTTGCAGAATAAGATAAACGGATTTTCTCCTGATCAAAAGTTTCCACAAGGTCAATTTGCGCCTTACCGTAATACCGGCTATGAATGGAATCCAAATGGTTCTGGTGTTATGTGGAAATCCTACAACTTTCCTGTGTTTTTACTCACAGAAAGTGGGTCAAAGACTCTTCAAGAGTTTGTAACAAAGAACAAGGACAAAAAGAAAGCTTATACTTCTAATGTCGCTGAGTTTGATCTGGTGATGCAGACAGTGAAATCTGGGACACTTGATTCAGAGTCTTGTTTAAAAGAAGAAACGTGCCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCGGATCAACACTTCCTCCTTACAGCAGTCTAAGCCCATTTTAATGACAGTGGCTTCCATGGATTCTGCTTCATTTTTTCGGGACAAAAGCCTTGGGGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTCGCGGCTGTTGATGCACTCTCTCATTTGGATAGTCTTGGTGACCTTAGTAAACAGCTTGTTTTTGCAGTTTTCACTGGAGAGGCATGGGGTTATCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACTTGCACTCAGATGCTGTTCGTGGCCTTAATCATGGATTAATTGAAAAGGTCATTGAAATTGGTTCTGTGGGAAAGGGTCTCAGTGGAGGTGTTAACAACTTTTTCGCTCATACAGAAGGGGATTCTTCTTCCACAAATCAGACAATGGCTGCCTTGAAACGTGCACAGGAGTCACTGTTATCTGAAAACATAAAGATAGCATCTGCAAGTTCTTCAAATCCTGGGATACCTCCATCGTCTTTAATGTCCTTTTTGGAAAAGAATCCTGCAATATCTGGTGTCGTTCTTGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCATAGTCACCTAGATGATTTATCAAATGTGAATTCATCAGCTGTTGTTGCTGCTGCTTCTCTTGTTGCCCGTACACTTTACATACTCGCTAGTAAAAATGAAGATATTCATGATTCAACTTTGGCTGCTATAAATGTTAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGACTGTGATCCTGGTCTTTCTTGTGAACTGGTGAAGAAATATATTTCACCCATGTCAACCTGTCCAAGCCATTATGTTGGTGTTATCTTGGATGAACCTTCATCGACACCATATACAGGATACATCAATGATGTTCCCAGGTTCATTTGGAATTTTCTGGCTGATAGGACTTCTATCCCCAGGAAGGCTAACAGCTCAGGTTGTCAACACGGTTGCAATGATAGAGATGAAGTTTGCATCAAAGCAGAGACCGATGGAAAGGGAGTTTGTGTTCTCTCTACAACAAGGTATGTTCCAGCATACTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGCCTCCTAATTCCTCTGAAAAAATGGGGGTTGTGGACCCTGTCTGGACTGAGAGCAACTGGAATTCAATAGGTATGCGGGTGTACACAGTCCAAAATGCTTCTTATGACCGGCTTGTTCTGTTTGGGGGCATCACTTTGACAATCTTCTCATACCTTGCAATAGCAACTGCTAGAACCTTGTTTTCCAAAGCAATGAAGAGGGACTGA 2010 0.4229 MALIVLSLFLLLFTFQLPFRSSGQSSSMESVPDLQNTMYASIEGYPCVRLLNLSGNIGCSNPGRDKVVAPIVRFGNVDKIAEPSAILVSVEDFPTLFTRISDDSRFASKVSGVLVEPSTDLQNKINGFSPDQKFPQGQFAPYRNTGYEWNPNGSGVMWKSYNFPVFLLTESGSKTLQEFVTKNKDKKKAYTSNVAEFDLVMQTVKSGTLDSESCLKEETCLPLGGYSVWSSLPRINTSSLQQSKPILMTVASMDSASFFRDKSLGADSPISGLIALLAAVDALSHLDSLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDLHSDAVRGLNHGLIEKVIEIGSVGKGLSGGVNNFFAHTEGDSSSTNQTMAALKRAQESLLSENIKIASASSSNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLVARTLYILASKNEDIHDSTLAAINVNVSLVEQLMGCLLDCDPGLSCELVKKYISPMSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRKANSSGCQHGCNDRDEVCIKAETDGKGVCVLSTTRYVPAYSTRLKFESGVWNVLPPNSSEKMGVVDPVWTESNWNSIGMRVYTVQNASYDRLVLFGGITLTIFSYLAIATARTLFSKAMKRD 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03027 669 Pfam Nicastrin 245 454 - -
Viun1g03027 669 Gene3D Zn peptidases 170 473 - -
Viun1g03027 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Viun1g03027 669 CDD M28_Nicastrin 40 622 - -
Viun1g03027 669 FunFam Nicastrin 173 469 - -
Viun1g03027 669 PANTHER NICASTRIN 9 668 IPR008710 GO:0016020|GO:0016485
Viun1g03027 669 SUPERFAMILY Zn-dependent exopeptidases 217 455 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03027 K06171 - gmx:100818367 1170.22