Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03008 ATGGCGTCTTTGGAAATAAAATCTGGTACATTGATTTCCTTACATGACCTGCATCCGTCATCTCCATTTTTTAAGCAAGGAGCTTCGCTCAGAATAACTGGAAAGTTACGTGAATATTCTATAGAGGCGTGCCTAGCAACGATTGTTGATGGCGATGACATTCTACAAGTTAGTACCGAACATCTGAGGGACCTTAGCTTTCAAGTTGGCTCTGTCTACCAATTCATTGGTGAACTCCTTATCCAACCTGATAATGAGGTAGTTTTGCAAGCTCGTGTTGGTAGAAACGTTGATGGGATCGATCTCAATCTTTACCATCAGTCCTTGCTGCTCTTAAGACAGTTCCAAGCCAATCATTTAAACAATCCAGAAACTATGTAG 381 0.4121 MASLEIKSGTLISLHDLHPSSPFFKQGASLRITGKLREYSIEACLATIVDGDDILQVSTEHLRDLSFQVGSVYQFIGELLIQPDNEVVLQARVGRNVDGIDLNLYHQSLLLLRQFQANHLNNPETM 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03008 126 Pfam Telomere-capping, CST complex subunit 6 118 IPR029146 GO:0003697|GO:1990879
Viun1g03008 126 FunFam CST complex subunit TEN1 6 122 - -
Viun1g03008 126 Gene3D - 7 121 IPR012340 -
Viun1g03008 126 PANTHER CST COMPLEX SUBUNIT TEN1 1 123 IPR029146 GO:0003697|GO:1990879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03008 Viun-Chr1 38627972 38631962 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03008 K23313 - gmx:100305519 221.861