Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03001 ATGAAGACGGGCTCCATGATTTTTTCATTATTAAATCTACCTAGATGTAGAATACAAAGATTAGCTAATTACTGGGGAGAAACCTTCCACAGTTTCAGTACGACTAGTGGAAACAATTCTAGCATCAGGCCGGTTGGTTATAGAGTTCATGGTCTTCAGGGAGGACAGAGAAAGAAGTGGACAAGACCTATATCCACAAATTCAGAAGGCAAGGGGAGCACCAAATCAAAAAGTATCAAGCATGAAATTTTGAGTGAAACCATTGTAGCAGGTGCTACAGTAGATGTAAATAAAACACAGCTAGATCAGTTCCAGGAAATTCAGTACCGTGACATACAACAAGAGATTGCCGAGAATAAAGACTTGTCTAGTTTAGTTACTGTTATTGTTTTTGATATCGAAACCACAGGGCTTAGCCGAGAGAATGGAAGGATTATTGAAATTGCACTTCGAGATCTTCAGGGTGGTGAGAACAGCACTTTTCAGACTCTTGTCAACCCTCAATGCAAAGTTCCTAATTCACATATTCATGGCATTACTACCGAGATGGTCAACAAACCTGATGTTCCAAGGATGGAGGAACTCATTCCTATTTTGTTGCAATATGTTCGAAGTCGTGAGAAGCCTGGGGGATATGTGTTATTTGTTGCTCATAATGCTCGTATTTTTGATGTCCCTTTCATCATCAACGAATTCCGACGTTGTTCTCAGAACATTCCTGGTAATTGGTTGTTCTCAGACTCCGTGCCTTTAGGACGTGAACGAATGAAATGTGAAGGAACTGAACTTTCTTCATATAAGCTTTCTGCCCTTCGTGACTTCTACGGAATTAAAGGGGGTGGACCAGATCACAGGGCCATGGAAGATGTGAACACATTGTCCTTGATTCTTCCCAGGCTGACCCGTGATCTGAAATTAACCCTATCTTCTCTTGTCGCAAAATCATTCAAAGAATCAGATATTATCAACTCCAACTCCAAGAAGAAGAAAAATTCAGACTAG 1002 0.4062 MKTGSMIFSLLNLPRCRIQRLANYWGETFHSFSTTSGNNSSIRPVGYRVHGLQGGQRKKWTRPISTNSEGKGSTKSKSIKHEILSETIVAGATVDVNKTQLDQFQEIQYRDIQQEIAENKDLSSLVTVIVFDIETTGLSRENGRIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTEMVNKPDVPRMEELIPILLQYVRSREKPGGYVLFVAHNARIFDVPFIINEFRRCSQNIPGNWLFSDSVPLGRERMKCEGTELSSYKLSALRDFYGIKGGGPDHRAMEDVNTLSLILPRLTRDLKLTLSSLVAKSFKESDIINSNSKKKKNSD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03001 333 Gene3D - 126 317 IPR036397 GO:0003676
Viun1g03001 333 MobiDBLite consensus disorder prediction 59 73 - -
Viun1g03001 333 CDD DEDDh 129 297 - -
Viun1g03001 333 SMART exoiiiendus 127 306 IPR013520 -
Viun1g03001 333 Pfam Exonuclease 129 293 IPR013520 -
Viun1g03001 333 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 64 326 IPR040393 GO:0008408
Viun1g03001 333 MobiDBLite consensus disorder prediction 56 77 - -
Viun1g03001 333 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 126 310 - -
Viun1g03001 333 SUPERFAMILY Ribonuclease H-like 125 307 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03001 Viun-Chr1 38575238 38579171 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03001 - - gmx:100799702 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03001 1 38575238 38579171 Viun1g03001 1 38575238 38579171 ECH