Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02983 ATGAGTGAAGAATCTAGAAAGGAACGTAGGGTCCTGGTGGCCGTGGACGAAACCGCTGAGAGCATGTATGCTCTTTCTTGGAGCCTCAAGAACATAATTTTCCAGAATTCCAGTGATACCCTTATCCTTCTATACGTCAAGCCCCATCAACCTGCTTTTGCCCCCTTGGATTCTACAGGCATAATGGATGATCCTGAAACTCCAGGGTGTTTGTTTTCTCCGGACGTAAACGCAACCATAGAGAAGTATAGTAAAGTTGTGGCCGATTGCGTGTTACAGAAATCCAAGAAAATGTGTAAAGATCTGGAAAACGTAAAGGTGGAGACACAGATAGAGAGTGGAGACCCAAAGGACGTGATCTGTGAGATGTCTCGGAAGTTGAATGTTGACTTGCTAGTTATGGGTTGCCACAGCCATGGAGATATAAGGAGGGCTGTCCTGGGAAGTGTGAGCAATCACTGTTCCCAGAACGTGAAGTGCCCAGTTCTGATTGTGAAGAAGCCAAAACCACATGCAGGTGCTGGGGACTAA 531 0.4652 MSEESRKERRVLVAVDETAESMYALSWSLKNIIFQNSSDTLILLYVKPHQPAFAPLDSTGIMDDPETPGCLFSPDVNATIEKYSKVVADCVLQKSKKMCKDLENVKVETQIESGDPKDVICEMSRKLNVDLLVMGCHSHGDIRRAVLGSVSNHCSQNVKCPVLIVKKPKPHAGAGD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02983 176 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 169 - -
Viun1g02983 176 PRINTS Universal stress protein signature 126 138 IPR006015 -
Viun1g02983 176 PRINTS Universal stress protein signature 144 166 IPR006015 -
Viun1g02983 176 PRINTS Universal stress protein signature 8 26 IPR006015 -
Viun1g02983 176 CDD USP_Like 10 165 - -
Viun1g02983 176 Coils Coil 92 112 - -
Viun1g02983 176 Gene3D HUPs 4 175 IPR014729 -
Viun1g02983 176 Pfam Universal stress protein family 9 166 IPR006016 -
Viun1g02983 176 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02983 Viun-Chr1 38488976 38490485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02983 - - gmx:100804158 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02983 1 38488976 38490485 Viun7g01797 7 23087717 23088762 ECH
Viun1g02983 1 38488976 38490485 Viun1g02983 1 38488976 38490485 ECH
Viun1g02983 1 38488976 38490485 Viun7g02010 7 25075898 25076955 PCT