Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02972 ATGGCTCTGGTAGCAGAAGATGTGAAGAAGAGATCGGAGGTGTACTACGGGGACGAAATCTGCCAAGTGAAGTCCAAAGAGCTACTCAAGGAAATCTCTCTCCCCAATGGTCTCTTGCCCCTCAAAGACATAGAAGAGTGCGGTTACGACCGAGAAACCGGCTTCGTCTGGCTCAAGCAAAAGAAGAATTACACTCACAAGTTCGAGAAAATCGGTAAACTCGTGTCCTACGCGCCCGAGGTCACTGCTCAAGTAGAGAAGGGAAAGATCTCCAAGCTCACCGGTGTGGAGACGAAGGAGCTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGACCCTCCCACCGGCAAAATCACCTTCAAAACCCCCGCAGGGCTATTTCGGTCTTTTCCTGTCTCCGCCTTCGAGATTGAGGAGGAGGCTCAGGCGAGTAAGCGCGTGGAGGAGCCCGCTGCGGCTGTGCAAGTCAAAGAGGTCTGA 486 0.5309 MALVAEDVKKRSEVYYGDEICQVKSKELLKEISLPNGLLPLKDIEECGYDRETGFVWLKQKKNYTHKFEKIGKLVSYAPEVTAQVEKGKISKLTGVETKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEEAQASKRVEEPAAAVQVKEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02972 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Viun1g02972 161 SUPERFAMILY At5g01610-like 7 142 IPR036758 -
Viun1g02972 161 Gene3D - 7 149 IPR036758 -
Viun1g02972 161 PANTHER T31J12.3 PROTEIN-RELATED 22 140 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02972 Viun-Chr1 38408831 38409689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02972 - - gmx:100306660 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02972 1 38408831 38409689 Viun1g02972 1 38408831 38409689 ECH
Viun1g02972 1 38408831 38409689 Viun7g01976 7 24792512 24793357 PCT