Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02970 ATGATCACGAACAACCTTGTTTGCAACTGCACCATGAAACCATCCCCTAAGATTCTAATGGGTTACAAGAATTCATCGTTTCTTGCAAGATGCCACCATACTCTAACCATGTCTATGTTCAATAACTCCACCACTTGTGGCCTCAATCTTCATCTCAACACCATGCAGTGCCCTTTTCACGTGCGGGAATTTGGGCGCATAATGCATGGAAGCCAACAAGTTTTCGGGCTGCTCCCTTCGAGTTTTGGCCAATCAAATTCCATCGGTTTAAGCGCAACAAGAAGCACAAAACGGGGTGTGTCTGCCACTGCCGGGATAGACTTCAAATTCAAGTCTCGTGACTTCTCAAGCTCCGTGGAGACATATGAGAACATTAATGGTAAAATGGTTTACGTAAAGGATGGCATGAATGTAGCGGAGGAAAGGGTTGACAATGACGAGGATAGTGTTGCAGGAGAGGAAGTGTCTGGTTTAGAAGCTGACGCGGAAAATAAGAATAGTGAGAATGTACAAGAGGGTGAGAAGGTAGAGGAAGAGGAGACAGAAGTGGAGAAAGAGGCATGGAAGTTATTGCAAGAGGCACTTGTGACATACTGTGACAACCCTGTGGGGACGGTGGCGGCGAACGATTCGGAGGATCAGCAAGCTTTGAATTATGATCAGGTTTTTATAAGGGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAATGAGATTGTCAAGAACTTTCTCCTTCACACCTTGCAGCTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGGCAGGGCCTGATGCCTGCTAGTTTCAAAGTTAAAATTATGAAAGTTGAAGGAAAAAGTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCTGCTATAGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTACAGGCTTATGGGAAGATTAGTGGGGACTACGGTTTGCAAGAAAGGTTGGATGTTCAAACAGGCCTAAAAATGATCCTTAATCTGTGCTTAACGGATGGCTTTGATATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAGGCCTTGTTTTACTCAGCTCTTCGTTCGGCCCGTGAGATGGTTGCTGCAGATGAAAATTCCAAGAATCTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTTCACATTAGAGAATACTATTGGATGGATGTGCAAAAGATGAATGAGATATACAGGTACAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTCTGTGGCTAATTGATTGGGTTCCAAAGAACGGAGGATATCTGTTGGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATCGTTTCCTCTTTGGGCACCCCAAAACAGAATGATGCCATTTTGAACCTGATAGAAGCAAATTGGGATGATCTCGTGGGGGAAATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCTCTGACCCCAAGAATACCCCTTGGTCATATCATAACGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGAATAGAACTGAACTGGCAGAGAAAGCAATTGCTTTGGCTGAGAAAAGGCTTCCCCGCGATTCTTGGCCAGAATATTATGACACACGCACAGCAAAATTTATTGGCAAACAAGCCAGGCTTTATCAAACTTGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAATTTGGCTTCCTTGTTATGCTGGGATGAGGATTTTGAGATCCTTGAGAATTGTATTTGTTTGCTTCACAAGAGTGGCAGAGCCAAATGCTCTCGTGTTGCTGCCAAGTATCAGATTCTCGTGTGA 2001 0.4413 MITNNLVCNCTMKPSPKILMGYKNSSFLARCHHTLTMSMFNNSTTCGLNLHLNTMQCPFHVREFGRIMHGSQQVFGLLPSSFGQSNSIGLSATRSTKRGVSATAGIDFKFKSRDFSSSVETYENINGKMVYVKDGMNVAEERVDNDEDSVAGEEVSGLEADAENKNSENVQEGEKVEEEETEVEKEAWKLLQEALVTYCDNPVGTVAANDSEDQQALNYDQVFIRDFIPSALAFLLKGENEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKIMKVEGKSEEVLDPDFGESAIGRVAPVDSGLWWIILLQAYGKISGDYGLQERLDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVAADENSKNLVGEINNRLSALSFHIREYYWMDVQKMNEIYRYKTEEYSLDATNKFNIYPDQIPLWLIDWVPKNGGYLLGNLQPAHMDFRFFMLGNLWSIVSSLGTPKQNDAILNLIEANWDDLVGEMPLKICYPALEHHEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMNRTELAEKAIALAEKRLPRDSWPEYYDTRTAKFIGKQARLYQTWTLAGFLASKMLLKNPNLASLLCWDEDFEILENCICLLHKSGRAKCSRVAAKYQILV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02970 666 MobiDBLite consensus disorder prediction 158 172 - -
Viun1g02970 666 Pfam Alkaline and neutral invertase 187 625 IPR024746 GO:0033926
Viun1g02970 666 PANTHER - 125 649 IPR024746 GO:0033926
Viun1g02970 666 Coils Coil 162 182 - -
Viun1g02970 666 Gene3D - 205 613 IPR012341 GO:0005975
Viun1g02970 666 FunFam probable alkaline/neutral invertase B 213 618 - -
Viun1g02970 666 SUPERFAMILY Six-hairpin glycosidases 187 617 IPR008928 GO:0005975
Viun1g02970 666 MobiDBLite consensus disorder prediction 142 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02970 Viun-Chr1 38400007 38403130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02970 - - gmx:100812691 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02970 1 38400007 38403130 Viun7g01974 7 24776939 24781232 ECH
Viun1g02970 1 38400007 38403130 Viun1g02970 1 38400007 38403130 ECH
Viun1g02970 1 38400007 38403130 Viun7g01974 7 24776939 24781232 PCT