Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02968 ATGGCAAGACTGGCGGCACTCCAACAGCACCTACTATCTTTCTCTCCCTTGACCCCCTCTCTTTCTGACTTAAGTGGAACCAGACTTCATGCTCAACATCAGTTGAAGAGAAAATTATGGCAGCCAAAAGGGACTCTCTGTGTCTCCGCATCAAGCACCAAGAATATCTTAAACATGGGAGGCACCAGGTTTATTGGAGTGTTTTTGTCTAGGCTCCTCGTCAAAGAGGGTCACCGAGTGACTTTATTTACAAGAGGTAAAGCGCCTGTCACTCAACAATTGCCATGTGAATCAGACGGTGATTATGCTGATTTTTCTTCCAAGGCTAAAGCTTTTGCAGTTTCAAGAAGGAAAGCAGCATCTTTGATCTTATCAACCTACATTATCTCAAAGGTCGGTGTAGCACTGGCTCAGCAGTCTCCTGTGTTCCGTGAATACATAGATGCATTTGATGGTTATTCATTCCAGTACCCAGGGAGTTGGATTCAAGTCCGTGGTGCTGGGGCTGACATATTCTTCAGGGACCCTTTTGTTCTCGATGAAAATCTCTCTCTTGAAATTTCTTCACCTTCATCCTCCCAATACAAGAGTGTTGAAGATTTGGGTCCACCCCAAGAAGCTGGAAAGAAAGTGCTCAAACAATATCTAACTGAGTTTATGTCAACGAGACTCGGTGTTAGACGTGAATCAAATATTCTTTCAACTTCTTCAAGAGTAGCTGATGATGGCAAGTTGTACTATGAAGTTGAGGTAAACATAAAGTCATATGCAAACAACAATGAACTTGCTGTTATGCCACAAGACCGGGTGGCTCGTCTGGAATGGGACCGGAGGTACCTATCTGTTCTTGGAGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCGGAAAATGTGTTTGCAGAGGAGGAAAGTGATCTTCGTAGAGTCATGGATTCGTTTCGAGTGAGCAAGATTGCTGCTTAG 972 0.4393 MARLAALQQHLLSFSPLTPSLSDLSGTRLHAQHQLKRKLWQPKGTLCVSASSTKNILNMGGTRFIGVFLSRLLVKEGHRVTLFTRGKAPVTQQLPCESDGDYADFSSKAKAFAVSRRKAASLILSTYIISKVGVALAQQSPVFREYIDAFDGYSFQYPGSWIQVRGAGADIFFRDPFVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPENVFAEEESDLRRVMDSFRVSKIAA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02968 323 Pfam PsbP 143 318 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Viun1g02968 323 NCBIfam photosystem II reaction center PsbP 119 318 - -
Viun1g02968 323 SUPERFAMILY Mog1p/PsbP-like 144 318 IPR016123 -
Viun1g02968 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 118 IPR036291 -
Viun1g02968 323 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 137 318 - -
Viun1g02968 323 PANTHER - 105 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02968 Viun-Chr1 38389912 38393162 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02968 - - vun:114184030 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02968 1 38389912 38393162 Viun1g02968 1 38389912 38393162 ECH