Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02963 ATGGGTTGTGGCGGTGCAGTCTCGCATCTCATTCTCACTGCAATGGCAATAGCAATAGCGATTCCATTCGGTGGCTGCGATACGCCTCCGGTGGTGTTCGTCTTCGGTGATTCCAACTCAGACACGGGTGGACTCGCTTCCGGACTCGGTTTCCCTATCAATCTTCCCAATGGCCGCACTTTCTTCCGAAGATCCACCGGTCGCTTGTCCGATGGACGCCTGGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCTGTGGTGGGGTCCTCTACTCTCCCTAAGTACGTCCCTTTCTCCTTAAATATACAGGTCATGCAATTCCGGCGTTTCAAAGCTCGTTCTCTTGATCTTGTTACAGCAGGTGCAAGAAATTTCATCAGTGACGAAGGCTTCCGCAATGCACTCTACTTGATTGATATTGGGCAAAACGACCTTGCTGATTCATTTGCCAAAAATCTGTCATATGCACAAGTGATTAAGAAGATCCCATCAGTTATAACTGAGATTGAGAATGCTGTTAAGAATTTACATAATGAAGGGGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCTAAAATACTTGCACTGGCCCAGAAGAAGGATCTAGACTCATTGGGATGTCTTTCTAGCTATAACTCTGCAGCAAGGTTGTTTAATGAAGCGCTGTTTCACTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTATGTTGATATTTATGGCATTAAGCATGACCTCATTACAAATGCCGCAAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGCTTTGGAGGGCCTCCTTACAACTTTGACGTAAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGACGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCATACAGAAGCTGCAAATACGTTCATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCGCGGACACCTTTTGATTTCTTTCGCCGTCACTGA 1086 0.4549 MGCGGAVSHLILTAMAIAIAIPFGGCDTPPVVFVFGDSNSDTGGLASGLGFPINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLDLVTAGARNFISDEGFRNALYLIDIGQNDLADSFAKNLSYAQVIKKIPSVITEIENAVKNLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEALFHLSQKLRSELKDSTLVYVDIYGIKHDLITNAAKYGFSNPLMVCCGFGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHHTEAANTFIASKILSMAYSTPRTPFDFFRRH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02963 361 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Viun1g02963 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 346 - -
Viun1g02963 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Viun1g02963 361 FunFam GDSL esterase/lipase At1g09390 21 348 - -
Viun1g02963 361 Gene3D SGNH hydrolase 28 349 IPR036514 -
Viun1g02963 361 SUPERFAMILY SGNH hydrolase 32 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02963 Viun-Chr1 38339818 38343836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02963 30 350 Acyl Lipid Metabolism Gene Families AT4G10950 26.316 4.45e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02963 - - gmx:100790553 642.114