Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02961 ATGTCAGTGTCTTTCTCTTCAACTTCGCTTCCGTTCTCCGAAGCTTCTTCATTCGCATTCCAAAGACACCCACATCTTTGCTCTAATCCACACACAGTTGCATCAAATAACTTCCACTCAGTAACTTATCGTGGTCGTCTTGCACTGAATGTTGGAGGCGGCACAAGCTTGTGTCGAAGATTTCGTGGCTTCAAACTGTGGGTACTTGAGAGACTCAACTTTCAATTTCAGTCACCAAAGCAACCTAAGAATATAATTCGCTTCGAAAGTAATTTGGAAAGCTCGGGTTTATCAAATGAAAAGGGACCAGTTTCTGATTCATCCTCAATTCTCCGTGCTCCTGATGATAAGATCACTTCCATGGACTCTCCATCTTTGCTTCAGACAGGTTTGTCTGCTACTCCGATGGATGTTAGCAGAAAACCCTCACTTTGCATTTCTGTCATAGGAGCCACCGGTGAGCTGGCAAAGAGTAAGATTTTCCCTGCTTTATTTGCCCTCTACTACAGTGGCTTTCTTCCTGAGAATGTAGGCATTTTTGGGTATTCAAGGAAGGATATAACGGATGAAGACCTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAGAATTGTGAGGACAAATTAGATGCTTTCCTCCGTAGAACATATCATATCAATGGAGGCTGTGACAATAAATATGGGATGTCCATGCTGAATGCCCGAATGGAGCAAATTGAGGGAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTGCCACAAGAAGCAGTTTTAGATGTTACGGCTTGTCTTTCTAGCACTGCTCAGACTCAAACAGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACTTTCTTCCTATAGGATGACACAATATCTTCTTTCAAACTTTGAGGAAAGGCAAATATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAATCTCACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTACATAGACAATGTACAGGTCATTTTATCAGAGGACCTGACCAAGCATCCAGGAAGATATTTCAGTGGCTATGGGATTATCCGTGATATTGTTCATAGTCACATTCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAGTAAGCCTTGATGGAGAAGATATTCGAAATGAAAAGGTCAAGGTTTTGAGATCAATTCGCAAATTGGAGCCTAAGGATGTGATTCTTGGGCAATATAAGGCAAGTGGTGGAGCCAAAGTTGACACATGCTTAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATTGACAATGCACGGTGGGATGGTGTGCCATTTTTTATTAAAACAGGCTTGGGACTCATCAAACACCAAATGGAGATACGGATTCAATTCCGAAATGTTCCGGGTAATGTGTACCGTGAGTGCATGGGGCATAACATGGACCGTGCTGTGAATGAGCTCATTCTCCGTGATGTTCCTGATGAAGCTATTTTGGTGAGAGTTAACAACAAGGTTCCAGGACTAGGCTTGCAACTGGACTCTTCAGAACTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTTCCAGATTCGTATGAGCAACTTCTTCTTGATGTCATTGATGGAGACAACCATTTGTTTATGAGAAGTGATGAACTGGAAGCAGCATGGAACATTCTAACTCCAATTCTGAATGAGATAGACAAAGAAAACATATCAGTGGAGCTTTATGAGATGGGGGGTCGAGGTCCTGTCGGGGCATACTACCTTTGGGCAAAACATGGTGTCCGTTGGGTAGAGGATTAA 1851 0.4192 MSVSFSSTSLPFSEASSFAFQRHPHLCSNPHTVASNNFHSVTYRGRLALNVGGGTSLCRRFRGFKLWVLERLNFQFQSPKQPKNIIRFESNLESSGLSNEKGPVSDSSSILRAPDDKITSMDSPSLLQTGLSATPMDVSRKPSLCISVIGATGELAKSKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCEDKLDAFLRRTYHINGGCDNKYGMSMLNARMEQIEGGSKTNRIFYLSVPQEAVLDVTACLSSTAQTQTGWNRIIFEKPFGFDALSSYRMTQYLLSNFEERQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIDNVQVILSEDLTKHPGRYFSGYGIIRDIVHSHILQTIALLAMEPPVSLDGEDIRNEKVKVLRSIRKLEPKDVILGQYKASGGAKVDTCLNGLTPTYFAAALYIDNARWDGVPFFIKTGLGLIKHQMEIRIQFRNVPGNVYRECMGHNMDRAVNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEQLLLDVIDGDNHLFMRSDELEAAWNILTPILNEIDKENISVELYEMGGRGPVGAYYLWAKHGVRWVED 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02961 616 NCBIfam glucose-6-phosphate dehydrogenase 144 614 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 316 614 - -
Viun1g02961 616 Gene3D Dihydrodipicolinate Reductase; domain 2 315 615 - -
Viun1g02961 616 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 143 615 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 135 613 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 FunFam Glucose-6-phosphate 1-dehydrogenase 315 614 - -
Viun1g02961 616 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 329 613 IPR022675 GO:0004345|GO:0006006|GO:0050661
Viun1g02961 616 Gene3D - 140 314 - -
Viun1g02961 616 PRINTS Glucose-6-phosphate dehydrogenase signature 357 374 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 PRINTS Glucose-6-phosphate dehydrogenase signature 375 391 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 PRINTS Glucose-6-phosphate dehydrogenase signature 306 334 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 PRINTS Glucose-6-phosphate dehydrogenase signature 282 295 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 PRINTS Glucose-6-phosphate dehydrogenase signature 453 479 IPR001282 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 148 326 IPR022674 GO:0006006|GO:0016614|GO:0050661
Viun1g02961 616 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 138 329 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02961 Viun-Chr1 38323536 38328610 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02961 K00036 - gmx:100796541 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02961 1 38323536 38328610 Viun1g02961 1 38323536 38328610 ECH