Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02959 ATGGGGTTTCAAAACCTGTCCTTGATGACTTTTATGATGATCTTGTGCATCACTCTATACGTGAATTGCACTGATATTGTTGAACTAGAAAATCATTCAGACAAAAGAGTACTTGCAGAAAGACCTAATAGTTTCATTCAACGAAATGGCACCCATTTTTTTCTAAATGGGAAGCCTCAATACTTCAACGGATTCAATGCATATTGGCTAATGACTTTTGCAGCCGACCCATCTACAAGTTCTAAGGTCACCACAGTTTTTCAAGAAGCTTCCCAACATGGTTTAAACTTAGCAAGAACCTGGGCATTCAACGATGCAGGTTACAAAGCCCTTCAAACTTCACCTGGTATTTATGACGAGAGTGTTTTCAGGGCATTGGATGTTGTGATATCAGAAGCAGGAAAATATGGGATACGATTGATTCTAAGCCTGGTAAATAATTGGAAAGACGATGGTGGAAAGAAACAGTATGTTGAATGGGCAAAACAACGTGGTCAGAGCGTAAGCACTGAAGATGACTTCTTCTCTAACCCTGTCACTAAGCAATTCTACAAAGATCATGTCAAGAGAGTGCTCACAAGAAAAAACACAGTGACTGGATTATTATACAAGGATGACCCAACCATTTTTTCGTGGGAGCTCATGAATGAACCTCGTTCTCTAGACTTATCTGGAAAACAAGTTCAGGATTGGGTGAAGGAGATGGCTGCTTATGTGAAGTCCATTGACAAGAATCACTTATTGCAAGTAGGGCTTGAAGGGTTTTATGGTGAATCAATGGCACAAAGAAAACAGTTCAATCCTGGATACGAAGGAGGAAGTGATTTCATTTCTAACAACCTAGTTCCTGAAATCGATTATGCCACCATTCATCTCTACCCTCAATGGATGTCGAGGTTTAACCAATCACTTGAAGATGTGTTCATTGAAAGATGGGTTAAGATGCATATTGAAGATGCAGAAAATGTTGTCCGAAAGCCCATTCTTCTTAAGGAGTTTGGGTTAAATTCAAGAATTCAAGGATACAGCGTTGCCCAGAGGGATCGATTGTATGCAAAACTATACAATTGGATATACTTGAGCGCTAGTGACAGGGGAGCGTGTGCTGGTGCAGCTTTTTGGCAATTACTTGTCGGAGGAATGGAAAACATGGCCGATGGTTATGAAATCATCTTTCAACACAATCCTTCCACTGCTAATATTATCTCCCAACAATCTTTAAGGATGTCTCATATTCGATAG 1242 0.4002 MGFQNLSLMTFMMILCITLYVNCTDIVELENHSDKRVLAERPNSFIQRNGTHFFLNGKPQYFNGFNAYWLMTFAADPSTSSKVTTVFQEASQHGLNLARTWAFNDAGYKALQTSPGIYDESVFRALDVVISEAGKYGIRLILSLVNNWKDDGGKKQYVEWAKQRGQSVSTEDDFFSNPVTKQFYKDHVKRVLTRKNTVTGLLYKDDPTIFSWELMNEPRSLDLSGKQVQDWVKEMAAYVKSIDKNHLLQVGLEGFYGESMAQRKQFNPGYEGGSDFISNNLVPEIDYATIHLYPQWMSRFNQSLEDVFIERWVKMHIEDAENVVRKPILLKEFGLNSRIQGYSVAQRDRLYAKLYNWIYLSASDRGACAGAAFWQLLVGGMENMADGYEIIFQHNPSTANIISQQSLRMSHIR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02959 413 Pfam Cellulase (glycosyl hydrolase family 5) 57 361 IPR001547 GO:0004553|GO:0071704
Viun1g02959 413 FunFam Mannan endo-1,4-beta-mannosidase 6 42 413 - -
Viun1g02959 413 Gene3D Glycosidases 42 413 - -
Viun1g02959 413 PANTHER - 9 412 IPR045053 GO:0004553
Viun1g02959 413 SUPERFAMILY (Trans)glycosidases 44 390 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02959 Viun-Chr1 38310225 38312291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02959 6 413 Glycoside Hydrolase AT5G66460 50.000 5.60e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02959 K19355 - gmx:100788081 616.305