Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02955 ATGGCGAGGAAGAAGATCAGAGAGTATCACTCGAAGAGGCTTCTCAAGGACCACCTCAAACGTCTCGCCTCTATCGACCTCGACATCCTTTCTGCTCAGGTCACACAGTCAACGGACTTCGCTGAATTTACAGACCTCCATCCGTGGTTGTCGTCAATAAAGTTGGTCGTGAAACCGGACATGCTCTTCGGGAAGCGCGGAAAGAGTGGCTTAGTGGCTCTCAATTTGGACATAGCTGAAGTCGCGGAGTTCGTCAAAGCACGCCTTGGCGTTGAGGTTGAGATGGGAGGTTGCAAGGCGCCTATAACTACTTTCATTGTTGAACCGTTTGTTCCTCATGACCAAGAGTATTATTTGTCCATTGTTTCTGAAAGGCTTGGCTCCACCATCAGCTTCTCCGAATGCGGGGGCATTGATATTGAAGAGAATTGGGATAAGGTTAAAACTATATTCCTTCCAACGGAAAAACAGTTGACTCCGGAAGCATGTGCACCGTTGATTGCTACACTTCCCTTGGAGATTCGGGGGACAATAGGTGATTTCATACTGGGTGTGTTTGCTGTCTTCCAAGATCTGGACTTCAGTTTTCTTGAGATGAATCCATTTACACTGGTGAACGAAAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGAGATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTCATTCATTCATTGGATGATAAGACAAGTGCATCGTTGAAATTTACTGTATTGAACCCAAAAGGACGCATCTGGACAATGGTAGCTGGAGGTGGTGCAAGTGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCTTGGTAACTATGCTGAGTATAGTGGAGCACCAAAAGAGGAGGAAGTGTTGCAGTATGCAAGAGTCGTAATTGATTGTGCTACTGCAGACCCTGATGGCCGTAAGAGAGCCCTACTTATTGGAGGTGGCATTGCAAATTTCACTGATGTTGCTGCCACATTCAGTGGGATTATTCGTGCGCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCGCGAGTCCACATCTATGTCAGAAGAGGTGGTCCAAACTATCAGACTGGTTTGGTAAAGATGCGTGCATTGGGGAGGAATTGGGAGTACCAATTCAAGTTTATGGACCAGAGGCCACAATGA 1224 0.4592 MARKKIREYHSKRLLKDHLKRLASIDLDILSAQVTQSTDFAEFTDLHPWLSSIKLVVKPDMLFGKRGKSGLVALNLDIAEVAEFVKARLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIDIEENWDKVKTIFLPTEKQLTPEACAPLIATLPLEIRGTIGDFILGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGDIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARVHIYVRRGGPNYQTGLVKMRALGRNWEYQFKFMDQRPQ 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02955 407 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
Viun1g02955 407 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Viun1g02955 407 SUPERFAMILY Succinyl-CoA synthetase domains 259 394 IPR016102 -
Viun1g02955 407 Pfam ATP citrate lyase citrate-binding 241 400 IPR032263 -
Viun1g02955 407 Gene3D - 1 233 - -
Viun1g02955 407 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 385 IPR005809 GO:0006099
Viun1g02955 407 Gene3D - 240 406 IPR016102 -
Viun1g02955 407 FunFam ATP-citrate synthase alpha chain protein 240 398 - -
Viun1g02955 407 Pfam ATP-grasp domain 6 203 IPR013650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02955 Viun-Chr1 38288728 38293140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02955 1 392 Acyl Lipid Metabolism Gene Families AT1G09430 86.990 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02955 K01648 - gmx:100787551 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02955 1 38288728 38293140 Viun1g02955 1 38288728 38293140 ECH