Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02922 ATGTCGCAGATACCGAAGGAGCCGGAGCAGGTGATGAAGATGAGAGGAGGAGGTGTGTTGGGGAAGAGAACGATTCTGAAGAGCGACCATTTCCCTGGTTGCCAGAACAAACGTTTGTCGCCTCAGATCGAAGGCGCTCCCAATTATCGCCAGGCATCGGACTCGTTGCATGTTCACGGTGTTGCCATACCAACCATTGATGGAATTCGGAACGTTCTCAACCACATTGGTGCTGGATTGAAAGTTCTGTGGATTAGCCTTCGTGAGGAACCGCTTGCCTACATTAATGGTCGTCCTTTTGTTCTGCGTGATGTGGAGAAGCCGTTCTCCAACCTTGAGTATACGGGAATTAACAGAGAAAGGGTTGAGCAAATGGAGGCTCGTTTGAAAGAATACATCCTGGTGGAGGCAGCAAGATATGGAAATAAGATTCTCGTGACTGATGAACTGCCAGATGGGCAGATGGTAGACCAATGGGAGCCGGTGTCTTGTGATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCAAGTAGCTGGATATCTTGTTGATTATGAACGCGTTCCTATAACCGATGAAAAATCACCAAAGGAAATGGATTTTGATATTTTGGTTAATAAAATTTCTCAAGCTGATGTAGACACGGAGATAATTTTTAATTGTCAAATGGGGCGTGGTCGAACCACAACTGGAATGGTCATTGCAACTTTGGTCTACCTCAACAGAATAGGAGCCTCTGGGTTTCCAAGAAGCAATTCCATTGGGAGAATTTTTCAAAGTATGACCAATGTTGCTGATCATTTGCCTGACACGGAAGAAGCAATTCGCAGAGGAGAGTATGCAGTCATTAGAAGTTTGATTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAACCTGCGTGAAGCAATTGCCACGTATCGCAATAGTATTTTGCGGCAGCCTGATGAGATGAAAAGGGAAGCATCACTATCATTTTTTGTTGAGTACCTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAAAGGGCTGCACTCCGTTCTAATACTACTGATAACTGTAGCTTTGCTGACTGGATGAGAGCAAGGCCTGAACTCTACAGCATTATTCGCAGGTTACTTAGGAGAGATCCAATGGGTGCACTTGGTTATTCAAGTTTGAAGCCATCTCTAAAGATGATAGCCGAATCGACTGATGGCCGCCCTTCTGAAATGGGTGTGGTTGCTGCCTTGAGAAATGGCGAGGTTCTTGGTAGTCAAACTGTTCTCAAAAGTGATCACTGTCCTGGATCTCAAAACCTAAGTTTACTTGAGAGTGTGGACGGTGCTCCTAATTTCCGAGAAGTTCCTGGATTTCCAGTTTATGGAGTGGCAAATCCAACAATTGATGGTATTCGATCTGTCATCCGGAGGATTGGAAGTTCTAAAGGTGGACGCCCAGTACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGGCCATACAAAAACATGCTGGAGTACACGGGCATTGACCGTGAAAGAGTGGAGAAAATGGAAGCCCGATTAAAAGAAGATATCCTAAGAGAAGCTAAGCACTATGGTGGTGCCATAATGGTTATTCATGAAACAGATGACAAACATATATTTGATGCTTGGGAGTTAGTTACTCCTGATGTAATTCAAACCCCACTTGAAGTTTTCAAAAGTCTGGAAGCTGAGGGGTTCCCTGTTAAGTATGCACGTGTGCCCATCACTGATGGAAAAGCTCCTAAAAGCTCTGATTTTGACACTTTGGCAATTAATATATCTTCTGCTGCCAAGGACACTGCTTTTGTTTTCAATTGCCAGATGGGCAGGGGCAGGACAACCACGGGTACTGTCATAGCTTGCCTTGTGAAACTTCGAATCGATTATGGTAGGCCCATTAAAATACTAGGTGATGATGTGATCTGTGAAGAATCAGATTGTGGTTCTTCAAGTGGAGATGAAGCTGGGGCTTATACCACTTCATTAACCTCAAGTACTTTGTCAAGAAAGACAGACGAGAAACAAAATCGTGCTTTTGGTATAAATGACATCCTTTTGTTATGGAAGATAACAACATTATTTGATAACGGTGTTGAATGCCGAGAGGCATTAGATGCTATCATTGATAGATGTTCTGCACTTCAAAATATTCGCCAAGCAGTCTTGCAGTATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGAGTAAGGAGGGTGGCATTAAATCGTGGTGCTGAGTACTTGGAGCGTTACTTTCGTCTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTTGATGGATTTTGTGGACAAGGAGAATCCAGAATGACATTTAAGGTTTGGTTGCATCAAAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTAAGACCGGGGCGTTTTTTCACTGTCCCTGAGGAGTTGAGAGAGCCACAAGAGTCTCAACATGGAGATGCTGTGATGGAGGCCATTGTCAAGGCCAGAAATGGTTCTGTTTTGGGGAAAGGCTCCATTCTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCATATACAAATTCATGGCGCACCTCATGTTTTCAAGGTTGATGAATACCCTGTTTATTGCATGGCAACTCCAACCATCTCTGGTGCCAAAGAGATGCTAGACTATTTGGGTGCTAAGCCTAAACCTTCATTCATTGCTCAAAAGGTTGTATTGACTGATCTGAGAGAAGAGGCAGTTGTTTACATCAATTATACTCCATTTGTCCTTAGGGAGTTAAACAAACCAGTTAATACACTCAAGTACGTGGGAATCACTGGTCCTGTGGTTGAACACATGGAAGCACGGCTAAAAGAAGATATACTAGCTGAGATTAGACAATCAGGTGGGCGAATGCTGTTACACCGTGAAGAATATAACCCCTCGACAAATCAGTCAGGTGTGGTTGGATACTGGGAAAACATTCGAGCAGATGATGTGAAGACACCAGCGGAAGTTTATTCTGCTCTGAAAGGTGATGGATATGATATTGTCTACCAGAGGATACCTTTAACAAGAGAGAGAGATGCTTTGGCATCTGATATTGACGCAATACAGTATTGTCAAGATGAGTAG 3219 0.4324 MSQIPKEPEQVMKMRGGGVLGKRTILKSDHFPGCQNKRLSPQIEGAPNYRQASDSLHVHGVAIPTIDGIRNVLNHIGAGLKVLWISLREEPLAYINGRPFVLRDVEKPFSNLEYTGINRERVEQMEARLKEYILVEAARYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVAGYLVDYERVPITDEKSPKEMDFDILVNKISQADVDTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGFPRSNSIGRIFQSMTNVADHLPDTEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALRSNTTDNCSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKMIAESTDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPGSQNLSLLESVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPVLWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKHYGGAIMVIHETDDKHIFDAWELVTPDVIQTPLEVFKSLEAEGFPVKYARVPITDGKAPKSSDFDTLAINISSAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYGRPIKILGDDVICEESDCGSSSGDEAGAYTTSLTSSTLSRKTDEKQNRAFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKVWLHQRPEVQAMKWSIRLRPGRFFTVPEELREPQESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVFKVDEYPVYCMATPTISGAKEMLDYLGAKPKPSFIAQKVVLTDLREEAVVYINYTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSGVVGYWENIRADDVKTPAEVYSALKGDGYDIVYQRIPLTRERDALASDIDAIQYCQDE 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02922 1072 CDD PTP_paladin 431 746 - -
Viun1g02922 1072 CDD PTP_paladin 15 308 - -
Viun1g02922 1072 SMART PTPlike_phytase_2 503 659 - -
Viun1g02922 1072 SMART PTPlike_phytase_2 85 240 - -
Viun1g02922 1072 SMART PTPlike_phytase_2 941 1072 - -
Viun1g02922 1072 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 244 IPR029021 -
Viun1g02922 1072 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 861 1063 IPR029021 -
Viun1g02922 1072 FunFam Paladin isoform A 25 264 - -
Viun1g02922 1072 Gene3D Protein tyrosine phosphatase superfamily 878 1069 IPR029021 -
Viun1g02922 1072 Gene3D Protein tyrosine phosphatase superfamily 440 670 IPR029021 -
Viun1g02922 1072 Gene3D Protein tyrosine phosphatase superfamily 25 277 IPR029021 -
Viun1g02922 1072 FunFam Paladin isoform A 441 673 - -
Viun1g02922 1072 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 427 660 IPR029021 -
Viun1g02922 1072 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 427 1063 - -
Viun1g02922 1072 Pfam Inositol hexakisphosphate 503 659 - -
Viun1g02922 1072 Pfam Inositol hexakisphosphate 85 239 - -
Viun1g02922 1072 Pfam Inositol hexakisphosphate 942 1067 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02922 Viun-Chr1 38021552 38031684 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02922 - - gmx:100788460 2033.84