Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02850 ATGGCCATGGCAGCTCCAACTCTGACCTCAATTCCTTCAAGAACAACCTTGAATCATCAAATCCATGGCCTTCAACTAAAATTCTCAGTTTCCACTTTCAATCCTCCAATCCAAAATAGAGGAAGGAGCGTTCGAATCCGATTATCATCTTCCAATCACAACCAGAATCAGTCCTCTCCCGGATTATACTCCGCAAAGAAATTCGAGCTCACCGCATCCAACGTAGACCTGGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGCAACGTCGACGTGGTCTCCGTCGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCGTGCGAGAGCTGCCCCAGCTCCACCACAACCATGACGATGGGAATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCCGTTAAGGACATTCGCCAAGTCTACGATAACCAACCCAAGGAAACTACCGTCGAGGCTGTGAACAGTCATCTTGATGTACTACGACCGGCCATAAAGAACTACGGAGGGAGCGTGGAAGTGTTATCCGTTGAAGGTGAGGAGTGCCAGGTTAAGTACGTTGGACCTGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTTCCTAG 651 0.4946 MAMAAPTLTSIPSRTTLNHQIHGLQLKFSVSTFNPPIQNRGRSVRIRLSSSXNHNQNQSSPGLYSAKKFELTASNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNQPKETTVEAVNSHLDVLRPAIKNYGGSVEVLSVEGEECQVKYVGPDSIGSGIKAAIKERFPDILNVTFSS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02850 217 Gene3D - 68 152 IPR034904 -
Viun1g02850 217 FunFam NifU-like protein 3, chloroplastic 68 151 - -
Viun1g02850 217 FunFam NifU-like protein 1 chloroplastic 152 215 - -
Viun1g02850 217 Pfam NifU-like domain 77 136 IPR001075 GO:0005506|GO:0016226|GO:0051536
Viun1g02850 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 146 IPR034904 -
Viun1g02850 217 Gene3D - 153 215 IPR034904 -
Viun1g02850 217 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 65 214 - -
Viun1g02850 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 151 214 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02850 Viun-Chr1 37568032 37569302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02850 K22074 - gmx:100527356 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02850 1 37568032 37569302 Viun1g02850 1 37568032 37569302 ECH