Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02846 ATGGCAAATAGACCGGATCCAGATATTGATGATGACTTCCGAGAGCTTTATAAAGAGTACACTGGCCCTCCAGGTTCTGCTGCTACGAACACGCAAGAGAGGGCAAAACCAAATAAGAGGTCTAATGCAGGGTCTGATGAGGAGGATGAAGGTCGGGACCCTAATGCTGTTCCCACTGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAAAGGAATTGGAAGAAAAGGAAGGAGGAGGAAATGATATGCAAGCTTTGCGGAGAATCAGGGCATTTCACTCAGGGCTGCCCATCTACCCTTGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCAAGAGACAAAAATGTACGGGCACTTTTCACAGAGAAAGTTTTAAGCAAGATTGAAAGGGACATTGGTTGCAAAATTAAGATGGACGAAAAATTTATCATTGTCAGTGGTAAGGATAGATTAGTTATGGCAAAAGGTGTTGATGCGGTACACAAGATTCGAGAAGAGGGTGAACAAAGGGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTGAGAGAAGTCCGGTTAATACACGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGGCCACGGAATACATCTCAATTTCAACAAAGGTTTGGTAGGCAGGAGAGGGCTGTTGAAGACCGAATCCGGGAGGATGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCAAGAGCTTTTGGAAATAGTGGAGCTAGAGGTCGATCAAGCCAGTCAAGATCTCCAAGGCAGGCCCCTTTTACAGGAAACTCATATAGTTCTTTTGATGGTCGTAACCAAAACATGGGTGCTTTTAGGAATGATGGCTGGGATCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTACAATGCCTCCCCACAGACTTTGGAAGAGTTAGAGTTGGAGTATAAGAACGAGGCAGCAGAGCTGATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGGGAGGCTATTAAAGATTTGAGGGAGAAGTACATGAGCAAAGTTGGCTTGGTAAGGGCTACACATGCAAAACAGTGGGAAGATTTCCTTCAGCATGATGCGCAGAGGTTTCAACAGCAGGCAGTTCAACAGATGTCTTCTGGTTATCGAGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGGTCCTCTGTCAATCCCCTCCCTATCCTGGGACGAATATACCATTGGATTCAAGGAACAGGTTCTCAGACAACATGGAACCTTATACTACTAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAAAATTCTCTATATATCAATCAAGTGGGTCCAGATTGCTCGAGTAAGCAGTTTAATGCAGTGGAGGACATAA 1467 0.441 MANRPDPDIDDDFRELYKEYTGPPGSAATNTQERAKPNKRSNAGSDEEDEGRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGEQRGSSSSQMTRSRSPERSERSPVNTRFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIREDVQKFARGSPQARAFGNSGARGRSSQSRSPRQAPFTGNSYSSFDGRNQNMGAFRNDGWDHRRESGIQPGHQFDYNASPQTLEELELEYKNEAAELMKIRDREEDEENFKHREAIKDLREKYMSKVGLVRATHAKQWEDFLQHDAQRFQQQAVQQMSSGYRGFKQQSFPEYDGSSVNPLPILGRIYHWIQGTGSQTTWNLILLGLMIILVNFIGVEILQKLTTDIKILYISIKWVQIARVSSLMQWRT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02846 488 MobiDBLite consensus disorder prediction 204 229 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 39 55 - -
Viun1g02846 488 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Viun1g02846 488 Coils Coil 322 346 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 1 18 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 174 298 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 259 290 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 24 38 - -
Viun1g02846 488 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Viun1g02846 488 PANTHER OS01G0252900 PROTEIN 1 417 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 1 72 - -
Viun1g02846 488 MobiDBLite consensus disorder prediction 230 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02846 Viun-Chr1 37549888 37553991 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02846 - - vun:114191959 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02846 1 37549888 37553991 Viun1g02846 1 37549888 37553991 ECH