Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02837 ATGACGATCGGAGATGCTTTTCTATGCTTACTATTCATCGCAACTTGTTGGATTTCAGCTACTTCTGCTGATTCCATCTATGGCTGCGGTGGTTTTGTCGAGGCGAGCTCATCGTTGGTAAAATCGAGAAAACAAACTGATACCAAGTTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACCCAATGCGCTCCAAATGGATATTATTTTATTCCGGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGCAATGAAGATATAAATTTTCGTTTCACAGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTAGGGGGAGAAAGCTGTTCAATTAAAAATGGAGGCCCATCAAATGTAAATGTTGAATTATTGTCCCTTTCTGGGGATCTTGTCTCTTCCGTCTCAACTTCATCATCAGGGAGTTACTTGTTTACAAATATCATTCCAGGAAAATATACACTACGTGCTTCAAATCCTGATATGGAAGTTGAAGTTAAAGGTTCAACACAGATTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGATATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCGATTGTTGGAGTCCATATTTTCTTATATTCAGATGATGTTTCTGAGGTAGAATGTTTGCAAGGCATTGTTACTGGTCCACGACAAGAAAGAGCTCTCTGTCACGCTACATCAGATGCTGATGGAAAGTTCACATTCAATTCAATACCTTGTGGGAGTTATGAACTTGTTCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCGCCACCCAGCGTCTCAGTTAATATCAAGCATCAGCACGTAACAGTGCCTCAAAAATTTCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTGGTTGATGGAAATGGCATGGGAGTGGAGGGTGTCAAAATCATAGTTGATGGCCATGAAAGGTCTATTACTGATAATCAAGGATACTACAAACTTGATCAGGTTACATCCAAGCACTATACCATAGAAGCCCAAAAAGAGCATTACAAATTCAAGAATTTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAATCTCTGTGGTTTGGTTAGGATGGCTAATGGTGGTCTGAAAGCAAAGGTAGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTATGTTCTTCCCGGGAATATCGCTTGTCAGCCATTGCTGCAACTCCTGAGAATGCTGCTGGACTCATGTTTACTCCATCTTATATCGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTCTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATTTGTATATGTTACCCTGGTGAGACAGGTTGAGAAACATAGTGGAGACAGAAAAACAATTAGCTTGACCACTGAAAGTGGTCAATTTCAGTTTTCAAATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACACAGTTCCCCTGAATCAGTCACGTTGGAAGATAATTGGTGCTGGGAACAGAACTTCATAGATGTAAATGTTGGTGCTGAGGACGTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCGACTCACAATGTTGATGGTTACCTGACTCAACCAGATGGGTCAATAGTGAATTTGAAAATTCAGAAAGGTTCCCAGCATATATGTGTAGAACATCCTGGTGTACACGAATTTAGTTTTGTTGACTCGTGTATCTTCTTTGGGAGTTCATCGGTGAAATTTAATACATCTACTCAATTGCCCATTCGCCTTACTGGAGAAAAGTATCTTCTTAAAGGACAGATAAATGTGCAGTCTGGCACACTTGATGCATTGCCTGAGAAAATAGTTGTTGATATTAAACATGACGGAGCTGGTGTTATTGATCAAGCCACAGCCACACTGAAGTCCCATGCGAAAGATCAAACAGATACCGCCATATTTGAGTATTCTGTTTGGGCCAATCTAGGAGAAAAACTTACCTTTGTTCCTTGGGACTCTAGGAATGATGGGCAGAAGAAACTTTTATTTTATCCTAGGGAACATCAAGTATCAGTGACAGATGATAATTGTCAAGCTTATATTCCTACATTTTCTTGTGAAGTCGGTGCATACATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAGTTTTTGCGGCTGGAGACAGCAGCATTACTACACTTAAAAATGGCGAACTAGTTCTTGAAACAACCACTGGTACTGATGGTTCCTATGTGGCAGGACCTCTGCACAATGATATCGGTTACAATGTCGAGGCTTCAAAGCCTGGATATCATTTAAAAAAAGTTGCGCCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTTAGTACACATACATCACAAAGATGATGCTGAAGAGCCCATTCCTTCTGTTCTCTTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCAGGGACTGGAGGGACATTCCAGTTTGATAATTTGTTTCCTGGAATGTTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTCCAGAGAAGTTATTTTCCAGGCCACGCGTGTAGCCTACAGTGCTACTGGTGTTGTCACTTTGTTGTCTGGACAACCCAAAGGAGAAGTTTCAGTTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCCAATGGAAATTATCGTCTGAGAGGACTACAGCCTGATACTGTCTATGTTGTCAAAGTGGCTAGAAGGGATGCTGTAGGCAGTTCTAATATAGAACGTGCATCTCCAGATTCAATTGCTGTGAAGGTTGGAACAGAAGATATCAAGGGTTTGGATTTTATAGTTTTCGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAACGGTACAAATGAACTACGTAAACATCTGATGGTAGAAATTAGGTCAGCCAGTGACCTTAACAAGATAGAGTCAGTCTTCCCCCTTCCAATTTCTAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCACAAAGCTCGCTTAAGTTTGAATCTGATATCATTGAGGTCGACTTGGAAAAAAATGTTCAAATCCATGTGGGTCCGCTGATATACAGGATCGAAGATCAACTGAAACAGGAGTTGACCCCTGCACCAGTATTCCCTCTTATAGTTGGATTCCTAGTTGTTTCACTGTTTATTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACAGTAGACATACCCACTCCAGGACTCAATGCGGCTTCAAGAAAAGACGTGAAGAAGCCAATGTTGCGAAAGAAGACTTATTAA 3594 0.4104 MTIGDAFLCLLFIATCWISATSADSIYGCGGFVEASSSLVKSRKQTDTKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSIKNGGPSNVNVELLSLSGDLVSSVSTSSSGSYLFTNIIPGKYTLRASNPDMEVEVKGSTQIELGFGNGVVDDVFFVPGYSISGFVVAQGNPIVGVHIFLYSDDVSEVECLQGIVTGPRQERALCHATSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNIKHQHVTVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGHERSITDNQGYYKLDQVTSKHYTIEAQKEHYKFKNLENYMVLPNMASIEDINAISYNLCGLVRMANGGLKAKVALTHGPDNVKPQKKQTDENGNFCFEVCSSREYRLSAIAATPENAAGLMFTPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVYVTLVRQVEKHSGDRKTISLTTESGQFQFSNVIPGKYRLEVKHSSPESVTLEDNWCWEQNFIDVNVGAEDVEGILFVQKGYWVNVISTHNVDGYLTQPDGSIVNLKIQKGSQHICVEHPGVHEFSFVDSCIFFGSSSVKFNTSTQLPIRLTGEKYLLKGQINVQSGTLDALPEKIVVDIKHDGAGVIDQATATLKSHAKDQTDTAIFEYSVWANLGEKLTFVPWDSRNDGQKKLLFYPREHQVSVTDDNCQAYIPTFSCEVGAYIEGSVSPPLSGVHIRVFAAGDSSITTLKNGELVLETTTGTDGSYVAGPLHNDIGYNVEASKPGYHLKKVAPHSFTCQKLSQILVHIHHKDDAEEPIPSVLLSLSGDNGYRNNSVSGTGGTFQFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGESREVIFQATRVAYSATGVVTLLSGQPKGEVSVEARSESKGYFEETVTDSNGNYRLRGLQPDTVYVVKVARRDAVGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTNELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPQSSLKFESDIIEVDLEKNVQIHVGPLIYRIEDQLKQELTPAPVFPLIVGFLVVSLFISMPRLKDLYQATVDIPTPGLNAASRKDVKKPMLRKKTY 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02837 1197 SUPERFAMILY Cna protein B-type domain 146 196 - -
Viun1g02837 1197 SUPERFAMILY Starch-binding domain-like 943 999 IPR013784 GO:0030246
Viun1g02837 1197 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 18 1183 - -
Viun1g02837 1197 Gene3D Immunoglobulins 143 216 IPR013783 -
Viun1g02837 1197 Gene3D - 329 406 - -
Viun1g02837 1197 FunFam Carbohydrate-binding-like fold 143 215 - -
Viun1g02837 1197 SUPERFAMILY Cna protein B-type domain 864 923 - -
Viun1g02837 1197 SUPERFAMILY Starch-binding domain-like 218 297 IPR013784 GO:0030246
Viun1g02837 1197 FunFam Carbohydrate-binding-like fold 328 402 - -
Viun1g02837 1197 Pfam Carboxypeptidase regulatory-like domain 946 998 - -
Viun1g02837 1197 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02837 K26500 - gmx:100794049 2166.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02837 1 37475158 37490447 Viun1g02837 1 37475158 37490447 ECH