Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02827 ATGGAAGATTTGGGTGGTACCCGATTTGATGGCCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAGACTTCACGCAGGCCGCGACCTGATTCGCAGCCTGTTTCTGACGGTCATGAACTGTCTCCCTTGTCCTCAACGCCGTCAGAGGATGCTGGCAAGATCTCTAGTGATGAGAATGTTGGCTACGATGCGAATTCCAAGAGGAAGGAGTTCAATCTTAATCATTGTGTCTCTCAAACTTCATCGGCTACTGGAGCTGAAGACGATAAATCTCATAAAAAGAGTAAAAAGGACGGTGGGTTCCAAGCATTTTATAATAATGAACCTGGACGGAGTGGCTTGCATAATAAACGCTGTAGTGAAGGTGTTCTTGCGCCGGCAAATTGGAGAGGTTCTAGCAAAGCAAAGGATAGCTTGGATTTAGAATCCAGAAATGCAGATTTGTATGCTGCAAGGAATCCTGAGAGTGTGAATTTGGCACAGTTTAGTGGCTCTCAAGATGGATTGGGGAATGAGAGCCGAGTTAAAAAGGTTAAACTCAAGGTTGGCGGGGTGACACGTACTATTCAAGCCAACTCAGCAACCAATGGTGCTTCAGGAAGCGGATCAACAATGAAGAGCTCTCGCTCATCGGATACCTCCCGACCACGCCAAAAACAACAGAGTAATTCAGATGAAAATAACTCTCCTTCGGACAAGAGAAGTGGTCTACAAGGCGTTCCGTGGAAGGATTTCTCAAGGGGTGGTTTTGGTCTTGGAAAGGAGGAATCATTGATGGGAAAGATTTCTACAAAGAACGCATCTAGTAAGCTGGGCGACAAGTCTGAACCAGTTCGAAAGAGTAAGCGAGTACCAAAGAGACGTGTGCTTGATGGGGAATTTGGTGACGATGATGATGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACATCAAAAGTTTCTGCAGTTTATAGAGATGAAGAAGAATTAAGCAAAAAACATCGAAAGCTCTCTAATATGGAAAATGCTGCCTCTACAAGGTCAGTCAAAGACGGTAAGAAAAAGTCTAGATCTGATAGAGTGTATGAGGACACCGATTATGAGGATGAAGAGGAGTCAGGAGGGTCTGAAGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAGTCTGTTGATGTACTGATGGACAGTAAGAGGGAAATTACCCTCACGACTCGTCAACGAGCCCTTCAATCAAGCAAAGACGCCTCAGCATCGAGTGCTAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCTCCTAGAAAGCAAAAGGAGAAGCTTTCAGAGGTAGACCAGCAATTGAAGAAAGCTGAAGCTGCACAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAGGCTATCAGAAAAATACTTGGTCAAGACTCTAGTAGAAAAAAGCGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAATTGGCACAGGAAAAGGCAGCAAATGCAAGAATGCATGCGTCAAATACCATCAAATACACAATGGGCCCGACTGGAACAGTTGTGACTTTTCCTGAGGAAATGGGGTTCCCTAGCTTATTTAACTCCAAACCTGTCAGTTATCCTCCACCTCGCGAGAAGTGTGCTGGTCCATCTTGTTCAAATCCTTATAAGTATCGGGATTCAAAATCAAAACTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAGGAGAAGGTGGTGGCTGAAACTACCTGTTGA 1764 0.4507 MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQPVSDGHELSPLSSTPSEDAGKISSDENVGYDANSKRKEFNLNHCVSQTSSATGAEDDKSHKKSKKDGGFQAFYNNEPGRSGLHNKRCSEGVLAPANWRGSSKAKDSLDLESRNADLYAARNPESVNLAQFSGSQDGLGNESRVKKVKLKVGGVTRTIQANSATNGASGSGSTMKSSRSSDTSRPRQKQQSNSDENNSPSDKRSGLQGVPWKDFSRGGFGLGKEESLMGKISTKNASSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSNMENAASTRSVKDGKKKSRSDRVYEDTDYEDEEESGGSEGELEDKKKKKQRKESVDVLMDSKREITLTTRQRALQSSKDASASSASLIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANARMHASNTIKYTMGPTGTVVTFPEEMGFPSLFNSKPVSYPPPREKCAGPSCSNPYKYRDSKSKLPLCSLQCYKAVQEKVVAETTC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02827 587 Pfam PAPA-1-like conserved region 444 528 IPR006880 GO:0031011
Viun1g02827 587 MobiDBLite consensus disorder prediction 37 53 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 1 116 - -
Viun1g02827 587 Coils Coil 442 469 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 401 421 - -
Viun1g02827 587 SMART PAPA_1_2 443 528 IPR006880 GO:0031011
Viun1g02827 587 MobiDBLite consensus disorder prediction 186 235 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 272 293 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 372 400 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 156 170 - -
Viun1g02827 587 Coils Coil 481 501 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 150 303 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 434 500 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 71 85 - -
Viun1g02827 587 MobiDBLite consensus disorder prediction 317 515 - -
Viun1g02827 587 Pfam HIT zinc finger 544 575 IPR007529 -
Viun1g02827 587 MobiDBLite consensus disorder prediction 317 335 - -
Viun1g02827 587 PANTHER INO80 COMPLEX SUBUNIT B 7 581 IPR029523 GO:0006338|GO:0031011
Viun1g02827 587 MobiDBLite consensus disorder prediction 342 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02827 Viun-Chr1 37449291 37453297 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02827 - - gmx:100814323 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02827 1 37449291 37453297 Viun1g02827 1 37449291 37453297 ECH