Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02812 ATGGCAACCATAACTGGTGTGAGTCTTTCAAGCCCCAGGGTTTTGTTCAACGCATCTGGCTCACTGAAAAATGCGCACGCCATAAAATTCGCACTTCCACCGCGCCAACCTATGCGACCGGGTGGTGTCCAGATGGGTCGGGTGCTGAGGATCCAACCCGTTCGCGCCGCGCCCGATAAGATATCGGAGAAGGTGGTGGAGAGCATAAAGCAGGCGCAGGAAACGTGCGCCGACGATCCGACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCGAAGCAAAAGGAAAAGGATTCAGACCCTCTGGAGACCTACTGCAAGGACAACCCGGAGACCAGAGAGTGCAAAACCTTCGATGAATGA 393 0.5852 MATITGVSLSSPRVLFNASGSLKNAHAIKFALPPRQPMRPGGVQMGRVLRIQPVRAAPDKISEKVVESIKQAQETCADDPTSGECVAAWDEVEELSAAASHAKQKEKDSDPLETYCKDNPETRECKTFDE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02812 130 SMART CP12_2 61 130 IPR003823 -
Viun1g02812 130 Pfam CP12 domain 61 129 - -
Viun1g02812 130 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 129 IPR039314 -
Viun1g02812 130 MobiDBLite consensus disorder prediction 97 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02812 Viun-Chr1 37389287 37390073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02812 - - gmx:100812168 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02812 1 37389287 37390073 Viun7g01803 7 23200813 23201474 PCT