Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02790 ATGGAAGACGAGAATTTCAGTTTTGGCCGCTCTACTGCCTCCAGAAGCTATCAATCCAGGCTCAAGTCACACTTCGAGCTTTTCATCGATTTTGATGAGGTCAATGGGGATGAGGATTTTAGGTCGGCTTATCCATGCCCTTTTTGCGCAGATGATTTTGATCTTCTTGAGCTATGTTGCCATATTGACTTGGACCATCCAGCAGAAGCCAAGTCTGCGATTTGTCCCGTGTGTACCGTGTGGATTGGGTCAAATGTCGTTGATCATATAGCAGCACAACATGGAAACTTGTTTAAGAGCCAGCTGAAATCAAAATGGTACAAAGATGAATCCTACCCAGATCTTTCCTTTTCAAGAAAGGGTAAACCAGATTTTTCTGCTGGGTTATCTAACGGGATGTCTACCTCCAACACATCAAGTGATCCATGGCTATCTTTTCTATATGGTGCATCTGCTGTTGATGAATGCGAAAATGTGCTGCCAGATTCTTCAAGTGAAATAAGCGTTGAAGAAGTGCACTCAAATGATAAAGTGTTAGAAAGGGATGTTCAGCCATATTTATCTGACAAAGACCAAATAGAGATAGCACAGCGCAGTAAATTTGTACAGGGACTTTTGGTGTCTACTATCCTTGATTCTGACTTCTGA 648 0.4213 MEDENFSFGRSTASRSYQSRLKSHFELFIDFDEVNGDEDFRSAYPCPFCADDFDLLELCCHIDLDHPAEAKSAICPVCTVWIGSNVVDHIAAQHGNLFKSQLKSKWYKDESYPDLSFSRKGKPDFSAGLSNGMSTSNTSSDPWLSFLYGASAVDECENVLPDSSSEISVEEVHSNDKVLERDVQPYLSDKDQIEIAQRSKFVQGLLVSTILDSDF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02790 215 Pfam Stress-induced protein Di19, C-terminal 128 210 IPR027935 -
Viun1g02790 215 Pfam Drought induced 19 protein (Di19), zinc-binding 43 95 IPR008598 -
Viun1g02790 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 212 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02790 Viun-Chr1 37222111 37225545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02790 - - gmx:100527153 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02790 1 37222111 37225545 Viun7g02035 7 25220303 25222984 ECH
Viun1g02790 1 37222111 37225545 Viun1g02790 1 37222111 37225545 ECH
Viun7g02035 7 25220303 25222984 Viun1g02790 1 37222111 37225545 ECH