Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02771 ATGGAACTTTTTGCAAAGTTCTTCTCGGTGTTGGTTCTATGCGTAGCCATAATGGCACACCAGGTAGTTGCACTTAACTTACTGAGTGGAGATCTAATTCACGGCAAGGAAACACTACCAAGAGGAAATACTCTAATCAATAAGGTATGCGCAAAGTCCTCAACCAGAGACCTCTGCATTGAAGTCCTCTCATCGGACCCATTGACTAGTCCTATTGCTGACCTCACGGACTTGGCAATCATTTCCCTCAGGGTTGCTGCAAAAAATGCTTCTGGCATCCTTACTGATACTAAAGTTCTCATCGATGACGCCAGCCTAGACCCTGATGTCCAACAAGGTTTGGCTGATTGTAAGGCGAACATCTTGGATGCAGCGAGCCAACTAGAGGACACCATTGCCTCCTTGTTGACTGGTTTGCAAGATGACGCACAACGTTGGCTCAAAGCTGCCTTGGCTACCATCGACACGTGTGACGTCTCCATCCCCGGAGACGACGATATTCTCTTTGTTGAGAGCACCGTCTTTCGTAAGCTATGCAACATTGCCATCATTGTCACCAAGCTCCTCGCTAATCCAGATAGATTATAA 588 0.4694 MELFAKFFSVLVLCVAIMAHQVVALNLLSGDLIHGKETLPRGNTLINKVCAKSSTRDLCIEVLSSDPLTSPIADLTDLAIISLRVAAKNASGILTDTKVLIDDASLDPDVQQGLADCKANILDAASQLEDTIASLLTGLQDDAQRWLKAALATIDTCDVSIPGDDDILFVESTVFRKLCNIAIIVTKLLANPDRL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02771 195 NCBIfam pectinesterase inhibitor domain 39 189 IPR006501 GO:0004857
Viun1g02771 195 SMART PMEI_2 41 185 IPR006501 GO:0004857
Viun1g02771 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 189 IPR035513 -
Viun1g02771 195 Pfam Plant invertase/pectin methylesterase inhibitor 45 183 IPR006501 GO:0004857
Viun1g02771 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 182 - -
Viun1g02771 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02771 Viun-Chr1 37092999 37093586 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02771 - - vum:124824324 247.284