Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun1g02760 | ATGAACACTAGGTGTTGGATGATATTTCTCTGCATACTGACTTATGCGTATGTTTCCGTTTCAGAGAAATTATCAGCGTACGACGTTCTTGAGAAATATGGCCTTCCAGTGGGTCTTCTTCCGAAAGGTGTGACAGAGTACGAGCTAAACGAAAAAAACGGCCAGTTCGCAGCGTATCTGGATCAAACATGCTATTTCAGTATACAATCGTATGACCTAAAGTACAAGTCCACCATCAAGGGCGTGATCTCGAAGGGGAAGTTGTCGAAGCTGAAGGGTGTTAGCGTGAAAATTGAGGTGTTGTGGATCCCAATCACTGAGGTCACTCGCGACGGCGATGACCTCAAATTCTCTGCCGGCGTTGCTTCCGCCGGTTTTAGCGCCGAAAGCTTTTCCGAGAGCCCTCAGTGTGGATGTGGATTCGATTGTGAGAATTTCAGCCAAAACGGTGACGTTTCTTCTTCTCTTTAG | 471 | 0.4671 | MNTRCWMIFLCILTYAYVSVSEKLSAYDVLEKYGLPVGLLPKGVTEYELNEKNGQFAAYLDQTCYFSIQSYDLKYKSTIKGVISKGKLSKLKGVSVKIEVLWIPITEVTRDGDDLKFSAGVASAGFSAESFSESPQCGCGFDCENFSQNGDVSSSL | 156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun1g02760 | 156 | Gene3D | - | 13 | 137 | IPR036758 | - | |
| Viun1g02760 | 156 | SUPERFAMILY | At5g01610-like | 8 | 143 | IPR036758 | - | |
| Viun1g02760 | 156 | Pfam | Protein of unknown function, DUF538 | 26 | 131 | IPR007493 | - | |
| Viun1g02760 | 156 | PANTHER | T31J12.3 PROTEIN-RELATED | 19 | 138 | IPR007493 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun1g02760 | Viun-Chr1 | 37045096 | 37045887 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun1g02760 | - | - | vum:124824334 | 218.394 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Viun1g02760 | 1 | 37045096 | 37045887 | Viun1g02760 | 1 | 37045096 | 37045887 | ECH | |
| Viun1g02760 | 1 | 37045096 | 37045887 | Viun7g01743 | 7 | 22368099 | 22369364 | ECH | |
| Viun1g02760 | 1 | 37045096 | 37045887 | Viun7g01743 | 7 | 22368099 | 22369364 | PCT |