Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02740 ATGCTTCCTCTCTCCCTTCTCAAAACTGCCCAAGGCCACCCAATGTTGGTGGAACTGAAAAATGGAGAGACTTATAACGGCCATTTGGTTAATTGCGATACATGGATGAACATCCATCTCCGAGAAGTCATTTGCACGTCTAAAGATGGAGATAGATTTTGGAGGATGCCTGAATGCTACATACGAGGCAATACAATAAAGTACCTTCGAGTTCCTGATGAGATCGTAAACCACCTGGTGTGGGGCGTGGGAGGGGAAGAGGCAGAGAAGAAGGTGCCGGTGGACGCCAACCAAAAGGAATTGGGCGTGGTTTTGATGATGGTAGTACCAAGGGAGCTGGAGGAGGTCGAGGCAAGGCTGGCCCTAGCGGAAAGCCTGGTGGAAACAGAGGGCGAGGTAGAGGCTGATTTTTACTGGTGGCGTAAACTACTTCAGATGGACCAGTTGACTACTTTCAGAGGGCATTTGTGCTCGTCTTTAATGTGTATCGGTTGCAACTTCACTGCCCGTGTTTCCTTGTGCATTCTTGGATTTTAG 537 0.4879 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEIVNHLVWGVGGEEAEKKVPVDANQKELGVVLMMVVPRELEEVEARLALAESLVETEGEVEADFYWWRKLLQMDQLTTFRGHLCSSLMCIGCNFTARVSLCILGF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02740 178 SMART Sm3 5 71 IPR001163 -
Viun1g02740 178 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 2 84 IPR027141 GO:0006396
Viun1g02740 178 Gene3D - 1 80 - -
Viun1g02740 178 FunFam U6 snRNA-associated Sm-like protein LSm4 1 81 - -
Viun1g02740 178 SUPERFAMILY Sm-like ribonucleoproteins 3 78 IPR010920 -
Viun1g02740 178 ProSiteProfiles Sm domain profile. 2 75 IPR047575 GO:0003723
Viun1g02740 178 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Viun1g02740 178 Pfam LSM domain 6 70 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02740 Viun-Chr1 36928719 36931472 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02740 K12623 - psom:113357552 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02740 1 36928719 36931472 Viun1g02740 1 36928719 36931472 ECH