Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02728 ATGGCACCAAAACCTGCAGAAGAAGAACCTCCTCAAGGAGAAACTCTCAAGTACCAGACGTGGGTTCTGAAAGTATTGATCCACTGCGATGGCTGCAAAAAGAGAGTCAAGAAAATTCTTCAAGGAATCGACGGGGTTTACAAAACAGAGGTGGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGGCGCTGAGATTCTCATCAAGAGGCTTTCAAGATCAGGGAGGCTAGTGGAGCTTTGGCCAGAGAAACCAGCTGAGAAGAAAGATAATAAAAAGCCGGGAAAGTCCAATAAGGGTGGTGATGTTAACAAGGAGAAGGAAAACCAGAAGAATGGTGAACCGGGTGCTGATGGTGGTTCGAACGAGGGTTCTAAAGATGGTGGTTCAAATGAGGGTTCTAAAGATGGTGAAGATTCTGAGAAAGAAGAACACAGTGATGAATGTGAGGAGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGAAGGTGAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAAAGGGGAAAACGGTGGTTCTGGTTCTGGTTCTGCATCTGCTCCTCCTAAGAATGGAGAAATTAGTGAAGTTGATGCATCAGTGCCTTCAAATTTGGGCACTTCAATGGCTGCCAAGGATCTTGTTAACCCTCCAATTCAGCATGCATACCCTTATCCACATGTGTATTATTCACCTCCTCCTCCTCCTCCACCAGCTTATGGATTAAGCTATAACACAGCATATCCTAACTCAAGTGCTTCATATTATGTTGGAGCACCCATCATGCCCATGCATGCTTACACCACTCCATACTCTAGACTGCCACCACCTCCTCCACCGTCTGATCCAATCAAACACTATGGTGATGATGCTGAGGATGATGAGTATGAAGGTGGTGGATATTGCTCCATTATGTGA 927 0.4574 MAPKPAEEEPPQGETLKYQTWVLKVLIHCDGCKKRVKKILQGIDGVYKTEVDSLQHKVTVTGNVGAEILIKRLSRSGRLVELWPEKPAEKKDNKKPGKSNKGGDVNKEKENQKNGEPGADGGSNEGSKDGGSNEGSKDGEDSEKEEHSDECEEGGGGGGGGGGEGGXKKKKKKKKKNKGENGGSGSGSASAPPKNGEISEVDASVPSNLGTSMAAKDLVNPPIQHAYPYPHVYYSPPPPPPPAYGLSYNTAYPNSSASYYVGAPIMPMHAYTTPYSRLPPPPPPSDPIKHYGDDAEDDEYEGGGYCSIM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02728 309 MobiDBLite consensus disorder prediction 131 153 - -
Viun1g02728 309 Pfam Heavy-metal-associated domain 27 73 IPR006121 GO:0046872
Viun1g02728 309 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 12 309 - -
Viun1g02728 309 MobiDBLite consensus disorder prediction 274 288 - -
Viun1g02728 309 Gene3D - 16 80 - -
Viun1g02728 309 SUPERFAMILY HMA, heavy metal-associated domain 18 83 IPR036163 GO:0046872
Viun1g02728 309 MobiDBLite consensus disorder prediction 231 246 - -
Viun1g02728 309 MobiDBLite consensus disorder prediction 84 209 - -
Viun1g02728 309 CDD HMA 27 77 IPR006121 GO:0046872
Viun1g02728 309 ProSiteProfiles Heavy-metal-associated domain profile. 18 81 IPR006121 GO:0046872
Viun1g02728 309 MobiDBLite consensus disorder prediction 271 309 - -
Viun1g02728 309 MobiDBLite consensus disorder prediction 84 115 - -
Viun1g02728 309 MobiDBLite consensus disorder prediction 224 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02728 Viun-Chr1 36880668 36882444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02728 - - gmx:100791626 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02728 1 36880668 36882444 Viun1g02728 1 36880668 36882444 ECH