Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02715 ATGATTTCTGCAGGAGGTAGGGATGCTATAAAGGGGCTGGGTTTAGGGTTAGGGTTAGGGTTGGGTGCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTCGAAGAGGGTGAGGCGTGCTCCTTTCAGAACCACGAGGATTATGATGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGTGGGCTGTCTGCTGAGAGTCTGGGGGCAAAATATGGTGGTTATGGATCATTTTTGCCCACCTATCAGCGATCTCCTGTCTGGTCTCATCCAAGAACTCCACAAAAAAATCATAGTCAAAATACGCCAAAATCCCCGAATAATTTGCTGCCAGAGGGTGGGCAGAGTGACGCTGTACAATGTTCCACTGGAACTCAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCTTCGAGGATGGCTTCAAACAAGGGTCTCTATCTAGAAGATGGAACCCATCAAGAAAAGTACTTGGTAACCACTAATGTTGATACATCCACTTCTAAGCACGAGTCTCTAAACAAGAAATTTACTAGCACATCGGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCAGATAATTTATCAACACGGAAAAATGCTGCAATATACAGTGAAATTGGTCTGGATGTGTCACCATCATCATCGCTAGATGACAGCCCCTCAGAAAGTGAGGGGATTTCTCGTGGTCCTCAAGAAGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATCATGACAGACCTCCCTCAGCCATTGTCACCACTTTCTGAAAGTATCATTGAATTAACTATAAAGGAAATGCGTGCCAGAGATAGCATCCCTGGTCTTGTTCATCTGGATGATGCAGAAAGTTTTGACATGTCACTAAATGAATCTAATAATGTGAAAGGAGATAGAAAATTGTCACGGGGGAGTGGGAGGAAAATGAAATCTCTGGAGGGCTGTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATGGTCGGATTGATGCTGGAGTGTTGTCAAGAAAGGAACAAAGTACAGATGCATCAACTATGGAGGAGCTAGTTTCAAATACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCGGTGATGACTTGGTTAAGGCTGATGATGGGCCGTGTGATTCTTTGAAGGAAACCCACAAAGTTGTGGTGAGGGAGAAAACCTTCTCTGGCCAGGGTCAAAAGGAAGGGCTGGAGCCAACATCTACTGAGGTGAATGGTTTTTCTGAACGGACAAAGGGAAGCTCAAGAAGAAAAGTTGTGGGAGATAAGGTTCCTTTTGATGACTATATAGTGAAAGAAAATTCTCAAGGAGATAATAATTGCCACTCAATAATGGCTGAATCTAACGTTTCCAAAGTTAGGACAGCATCAAACACTGAAGAGCCTCCTAAGAAGGCTAATCAGAGGGGTAGCCTATGTGAACAAGACAGTATGGCAATACCTCTCGTGACAGAACATCCCGTTCTGGTTGGTAAGAAGAAGGCAAAGGGAAGTCATGACACCGTGGTTATGGAAAGGGAAAAAGAAAACTTGAAGATTGGATCCTCTTCGGCTCCTAAAACAAAAAGGAGTTCTGATGATAGTTCTGCATCAAAAAATGAGACTGAAGATGTTAGAGCACAAAAGAGTCTTGGAAAGACTCGAGATACATACAGAGATTTCTTTGGAGAATTGGAAGAAGAGGAGGACAGAATCGATGTGCTAGAGACCCCATTTGAAGAAAAAGTGAAGGAACCTGAGGTGGTTGAGAGGAGTGCACCTACAACTAGTTTTGGAGCAAAGGAGAGACCAGGTGCTAAGAAAGTTGATAAGCTGTTAACAGCTGAAATATACCCTAAATCAGCCACAAATATTTGGTGCACTGGAAATGCGAATGGTACTGACGCTGAGAATGGTAAAGGGATTCCTGTAATGATACCTCCTGTTGAGATGGAAGATAATTGGGTGCAATGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGATAACCTACCCGAAAAGTGGCTATGTAGTATGCTTAATTGGCTGCCGGACATGAATCGGTGTAGCTTTAGTGAGGATGAAACCACTAAAGCACTTATTGCATTATACCAAGGGCCTCCTTTTGATGGTCAAAGCAACCTGCAAAATGCCTCTGGCAGTGTTATGGTGGGAGGAGCCATGGCAACATCCCAACCTCCTAACCAGCACCAGCTAAATAATGATGTGCATGCGGTGCCTGGGGGGAAGAAAAAGTTTGTGAAGGAGATACCAAATTCTACAAATAAAGACTTTTCTCAATCCTCATATCCTACGAAGAAAAACTTGTCAGCGGTGAAAAGTAGGAGTTTAAATGATGTGAAATCTCCTGTCATGAGTGAGGCTGATGTTCCATCAGAGAAACACAAAAATAAGCACAGGACGCAGGAACACAGTTCTGATAGGGGTGATACGAAGAATATGAAGGTCAAAAGCAGGAGGGATCATGATCAAGATTTTCCTAGGCCATCCAAGAAATCTAAGACTGACAAGGCTCATTCTACCAATGAAGACTGGGTAGAACAGAGTGGGACTACTAGGAAGGTGGGTGTTCAAAGTTCAACTAGCACTTTTCCAACTACTTCAGTTGCCAAAGATCGACCAAGACAGAAAGCCCACTCTTCTTCAAGGGACTCCAAATCAAGAAAAGACAGGATTCCAGTTTCTGCTGAAAACACAAGAGATAAAGGTCAGGGTTCGTTGGATGAGGGATCTCTGGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAAAGAAAACTTAAGGGATATCAGGATGCTATAACTTACAGCCCAGGTAATCCTCGCATACAGGAGAGCAAAACTTCTGAGCATGATTTCAGTGATTCAAGGAAGGAAAAGAAGGCAAAAAGTTCAAAATCCGGAGGCAAAGAATCAAGTACCAGTAAAGGTAGTGGTAGGACTGACAAAAAGGACTTGGGGTCTTTACAGGTTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCAGGAAGTGAAGGGCTCACCTGTGGAATCAGTGTCTTCATCACCCATTCGAGTTTTAAATGCTGATAAGCTTTCAAACAAGGAAATTATTGGGAAAGATGATTCACGTGATGTTGCTGCTATGGATAGTCCAAGAAGATGCTCAAATCGTGATGATGATGGTGGGAGTGATCGATCCGGAACGGCCAAGAAGGATAAATCTTTCACCATTGCCAACAGGCCAGATTTTCAGGACAAGGGTGTTAATTACGTGTCCGATACAAAGCTTAAAGCTGAAACAGCCAGCTATTGTACCAATGGTGGTGTTGACACCATAGTCCCAGATGGGACCTATGCAGGCAAAGAGCATAAACATCCAGGTGAAGACAAAACCGATGTTTATCATGCTAATATGTCTCATACAAGGAAGAATGGCATAGAATCAGGTTTGGAGGACAACAATGACGGCTGTAAGTCAGAATCCCATGCAGATAAGGTCAAGAATGCTAGTTCTTCAAGTCAACTGAAAAATCAGTCTCCTCTAGGTGAGGCAAAGCATAAGGATGGAAAAAATAAGTTGCAGGAGAAGTTTGGGATCAAGCCTGACCAAAGTGAGAATATACATGCTGTCAAGAAAGATTACACAGAGAAAAATGAGGCTAGGAAAAAAGAGAATCACTTAAATCGAGGTCATGACTTTCAAGATGTTAGTGTGGATGCCCTTTGCAAACAGGATGCATTTCATGCTCCCCCGCAGACTCAGTTGCCAGACTCTGATAGATCCACAAAGAGGTCTCTGTTGGAAAGAACTGATCAAGAATTGGTTTACATAAAGGAAATGGTGATGTCGAAGCTGACCCTTCCAAAGTTGATGATGTGTCAAAGTTACCAAAAAGGCTCGAAAAAGACTGACCATCAAAATGGAAATCAGCAAACTGGTTCGAGAAATCCTGTACTTAATGGTCACAAGTCGAAGGAGCTTGATGCCCCTAGCCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATTTGGCTGATCGTCTTAAGCATTCTGGATCCACTGGTGAGAGCACTAGTCTATACTTCCAGGCAGCCCTCAAATTTCTTCACGGAGCCTCTCTGTTAGAATCTGGCAACAGTGATAATTCTAAGCACAGTGAGATGATTCAATCAAAACAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTTTGTGCCCACGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCACTAGCCTACAAATGCATGGAAGTAGCATATATGAGGGTAGTATATTCTTCACACTCTAGTGCAAGCAGAGATCGGCATGAGTTGCACAACACACTGCAAATGATTCCTCTTGGTGAGTCTCCATCGTCATCTGCCTCTGATGTTGACAATGTCAACAACTCAACAGCTGCTGACAAGGTTGTCACCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTATTGCTGCACGACATCGTCCTAATTTTGTGCGATTGCTCGGTTTTGCTCAGGATGTTACTTTTGCCATGGAAGCATCAAGGAAATCACGGAATGCTTTTGCAGCAGCTAATTCAAGCCCAGGTGTGGGCAAGAATACAGATGGTATCTCCTCTATCAAAAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTTCGTTTGGTACGGGTTGCTGTGGAGGCCATTAATCGTTGA 4872 0.4331 MISAGGRDAIKGLGLGLGLGLGAGRREMVESELEEGEACSFQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGLSAESLGAKYGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLLPEGGQSDAVQCSTGTQSSRLGPGSGNSSRMASNKGLYLEDGTHQEKYLVTTNVDTSTSKHESLNKKFTSTSDQKTLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRGPQEAPFESPTIILQIMTDLPQPLSPLSESIIELTIKEMRARDSIPGLVHLDDAESFDMSLNESNNVKGDRKLSRGSGRKMKSLEGCESSMEVKGSTKKNGRIDAGVLSRKEQSTDASTMEELVSNTMKLPLLSSSYSFGDDLVKADDGPCDSLKETHKVVVREKTFSGQGQKEGLEPTSTEVNGFSERTKGSSRRKVVGDKVPFDDYIVKENSQGDNNCHSIMAESNVSKVRTASNTEEPPKKANQRGSLCEQDSMAIPLVTEHPVLVGKKKAKGSHDTVVMEREKENLKIGSSSAPKTKRSSDDSSASKNETEDVRAQKSLGKTRDTYRDFFGELEEEEDRIDVLETPFEEKVKEPEVVERSAPTTSFGAKERPGAKKVDKLLTAEIYPKSATNIWCTGNANGTDAENGKGIPVMIPPVEMEDNWVQCDRCHKWRLLPVGTNPDNLPEKWLCSMLNWLPDMNRCSFSEDETTKALIALYQGPPFDGQSNLQNASGSVMVGGAMATSQPPNQHQLNNDVHAVPGGKKKFVKEIPNSTNKDFSQSSYPTKKNLSAVKSRSLNDVKSPVMSEADVPSEKHKNKHRTQEHSSDRGDTKNMKVKSRRDHDQDFPRPSKKSKTDKAHSTNEDWVEQSGTTRKVGVQSSTSTFPTTSVAKDRPRQKAHSSSRDSKSRKDRIPVSAENTRDKGQGSLDEGSLDLGNCDSIGSVKKRKLKGYQDAITYSPGNPRIQESKTSEHDFSDSRKEKKAKSSKSGGKESSTSKGSGRTDKKDLGSLQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRVLNADKLSNKEIIGKDDSRDVAAMDSPRRCSNRDDDGGSDRSGTAKKDKSFTIANRPDFQDKGVNYVSDTKLKAETASYCTNGGVDTIVPDGTYAGKEHKHPGEDKTDVYHANMSHTRKNGIESGLEDNNDGCKSESHADKVKNASSSSQLKNQSPLGEAKHKDGKNKLQEKFGIKPDQSENIHAVKKDYTEKNEARKKENHLNRGHDFQDVSVDALCKQDAFHAPPQTQLPDSDRSTKRSLLERTDQELVYIKEMVMSKLTLPKLMMCQSYQKGSKKTDHQNGNQQTGSRNPVLNGHKSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKHSGSTGESTSLYFQAALKFLHGASLLESGNSDNSKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHSSASRDRHELHNTLQMIPLGESPSSSASDVDNVNNSTAADKVVTISKSVNSPQVAGNHVIAARHRPNFVRLLGFAQDVTFAMEASRKSRNAFAAANSSPGVGKNTDGISSIKKALDFSFQDVEGLLRLVRVAVEAINR 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02715 1623 ProSiteProfiles Zinc finger CW-type profile. 668 721 IPR011124 GO:0008270
Viun1g02715 1623 MobiDBLite consensus disorder prediction 903 938 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 475 498 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 783 812 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 750 766 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1182 1202 - -
Viun1g02715 1623 Pfam CW-type Zinc Finger 673 719 IPR011124 GO:0008270
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1333 1356 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1070 1116 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 819 874 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 875 901 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1180 1269 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 102 159 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 415 442 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 228 245 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 517 539 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 419 435 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1203 1217 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 228 253 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 551 570 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1218 1269 - -
Viun1g02715 1623 Gene3D - 665 723 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1022 1064 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 977 999 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 750 1117 - -
Viun1g02715 1623 Coils Coil 1379 1399 - -
Viun1g02715 1623 PANTHER CW-TYPE ZINC FINGER 26 1623 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 517 570 - -
Viun1g02715 1623 MobiDBLite consensus disorder prediction 1333 1374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02715 Viun-Chr1 36787660 36799541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02715 - - var:108328921 2862.02