Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02698 ATGGCTGAAGGGGAACATATTGAGCTTAAATTTCGCATATATGATGGAACTGATATAGCACACAACACCTATTCATCATCAACAACCATTGCTACCCTTAAGCAGAAGCTAATTGCTGAGTGGCCTCAAGGTAAAACAATTACACCAAAGGTAGTAAGTGACCTAAAACTCATACATGCCGGAAAAATCTTGGAAAACAACAAAACTCTGGCCGATTCCAGAATAACATTTAGTGACATCCCTGGAGGTTTTGTTACGATGCATGTTGTAGTACAACCTCGACCGACTAAAAAGAAATCAGAAAAGAACCAAGATGAGAAACAAAAGACAAATTCATGTTCATGCAGTGTTCTTTAG 357 0.3838 MAEGEHIELKFRIYDGTDIAHNTYSSSTTIATLKQKLIAEWPQGKTITPKVVSDLKLIHAGKILENNKTLADSRITFSDIPGGFVTMHVVVQPRPTKKKSEKNQDEKQKTNSCSCSVL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02698 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
Viun1g02698 118 PIRSF MUB 1 118 IPR017000 -
Viun1g02698 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Viun1g02698 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 5 116 IPR039540 -
Viun1g02698 118 MobiDBLite consensus disorder prediction 93 118 - -
Viun1g02698 118 Gene3D - 1 100 - -
Viun1g02698 118 CDD Ubl_MUBs_plant 7 94 - -
Viun1g02698 118 SUPERFAMILY Ubiquitin-like 3 98 IPR029071 -
Viun1g02698 118 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02698 Viun-Chr1 36715535 36716450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02698 - - gmx:100818909 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02698 1 36715535 36716450 Viun1g02698 1 36715535 36716450 ECH