Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02695 ATGAGCACACACACCAAAACCAACGTCGTCGATGGGGTGCACACCGATGTCAAGGTCGTGGAAACCCCAACCAAAGAAATTCCCTACCATCTCTTGATGCGCTTTCTTGCCCTCTCTCTCACTCTTGTTGCAACCATCGTTGTTGGTGTAGACAATCAGACCAAAGTCATCTCCTACGCTGAAATGAATTTCAGAGCCTCTGCTAAGTGGGAATATATGTCTGCCATGGTGTTTTTCGTGGTGTCAAACGCAATAGCATGCTCGTATGCAGCTGCATCATTGGTGATAACAGTGATGGCGAGAAGCGGTGGAAGAAGGAAAAGCGATTTGACAGATTTGGTGATAACAGGTTTGGACCTTGTGCTGATGGCAGTGTTGTTCTCGGCGAATGGTGCAGCATGTGCAGTGGGAGTGATAGCACAGAAGGGTAACACGCACGTGCAGTGGATGAAAGTGTGCGATGTGTTTGACGCGTATTGCCGCCACATGACAGCTGCATTGGTGCTCTCCATTATTGGGTCGTCGGTGTTTCTGTTGCTGGTGCTGCATTCTGTTGTGAAACTCCATTGCAGATCAAGAAGCTAG 585 0.4872 MSTHTKTNVVDGVHTDVKVVETPTKEIPYHLLMRFLALSLTLVATIVVGVDNQTKVISYAEMNFRASAKWEYMSAMVFFVVSNAIACSYAAASLVITVMARSGGRRKSDLTDLVITGLDLVLMAVLFSANGAACAVGVIAQKGNTHVQWMKVCDVFDAYCRHMTAALVLSIIGSSVFLLLVLHSVVKLHCRSRS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02695 194 PANTHER CASP-LIKE PROTEIN 1U1 27 190 IPR044173 -
Viun1g02695 194 Pfam Casparian strip membrane protein domain 30 174 IPR006702 -
Viun1g02695 194 NCBIfam plant integral membrane protein TIGR01569 31 187 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02695 Viun-Chr1 36700536 36701564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02695 - - gmx:100817307 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02695 1 36700536 36701564 Viun1g02695 1 36700536 36701564 ECH