Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02688 ATGCAGGAAGAGAAAGCCGAGCGAGTGATAGTGGTCGGAGCAGGCCCCTCAGGGCTTTCCGCCGCCGCATGTTTGAGGAAGCACTCCATTCCGTTCATAATCCTCGAGAGAGAAGACTGTTTCGCTTCTCTGTGGAAGAAATACTCCTACGACCGTCTCCACCTCCACCTCAGGAAGCACTTCTGCCAGCTTCCACACAAACCATTTCCACCCTCTTTCCCTCCCTACGTTCCCAAGAACCACTTCCTAGACTACCTCGACGACTACGTCTCCCACTTCGCCATCGCGCCGCTCTATCGGAGGACGGTGGAGCTCGCCCAGTACGACGGCGCCCGCCGCTGCTGGACGGTGGAGGCCCGGAATGGGGAGTCCGGCGAGGTGGAGAAGTACTGCGGGAGATTCCTGGTGGTGGCTACCGGGGAAACTAGCGATCCCTTTGTGCCGGCGGTGGAAGGGTTGAGTAGTTTCCCTGGGAAGGTGATTCATTCTACTCGGTTCAAGTCAGGGAAGGAGTTCAAAGACGAGAATGTTCTTGTTGTTGGGTCTGGGAATTCCGGCATGGAAATCGCTTTGGACCTTGTCAACCATGGTGCCAAAACCTCCATTCTTGTTCGAAGCCCGGTTCATTTTTTATCGAGGGAAATGGTGAGTTTAGGGTTGTTTCTGCTGAAGTATTTGTCGTTGAGCATGGTGGACTCGTTGATGGTGATTCTGAGCACCATGGTTTACGGTGATGTGACTAAATATGGGGTCAGAAGACCCACCGAGGGACCCTTTTACATGAAGGTCAAGCATGGAAAATATCCAGTTATTGACGTTGGAACCTATAAGAAGATAAAATCTCAAGAACTAAAGGTTTTTGCAGCAGAAATAGAAAGCGTAAGAGGCAAGGATGTCCTATTCAAGAATGGGGAGTTACACCCATTTGACTCCATTGTTTTTTGCACAGGCTTCAAGAGATCAACCAACAAGTGGCTCAAGGGTGATGATTACCTTCTGAACGATGATGGTCTTCCGAAGCCAAGTTACCCCAGGCATTGGAAGGGAAATAATGGTTTGTACTGTGTTGGGCTATCAAGAAGAGGCTTCTATGGAGCTGCTGCAGATGCTGAAAATATAGCAAATGATATAAGCTTCTTCATGCAACAACCCTGA 1155 0.5004 MQEEKAERVIVVGAGPSGLSAAACLRKHSIPFIILEREDCFASLWKKYSYDRLHLHLRKHFCQLPHKPFPPSFPPYVPKNHFLDYLDDYVSHFAIAPLYRRTVELAQYDGARRCWTVEARNGESGEVEKYCGRFLVVATGETSDPFVPAVEGLSSFPGKVIHSTRFKSGKEFKDENVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSREMVSLGLFLLKYLSLSMVDSLMVILSTMVYGDVTKYGVRRPTEGPFYMKVKHGKYPVIDVGTYKKIKSQELKVFAAEIESVRGKDVLFKNGELHPFDSIVFCTGFKRSTNKWLKGDDYLLNDDGLPKPSYPRHWKGNNGLYCVGLSRRGFYGAAADAENIANDISFFMQQP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02688 384 PIRSF FMO 5 358 IPR000960 GO:0050660|GO:0050661
Viun1g02688 384 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Viun1g02688 384 Pfam Pyridine nucleotide-disulphide oxidoreductase 10 208 - -
Viun1g02688 384 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 7 379 - -
Viun1g02688 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 8 30 - -
Viun1g02688 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 172 196 - -
Viun1g02688 384 SUPERFAMILY FAD/NAD(P)-binding domain 8 275 IPR036188 -
Viun1g02688 384 Gene3D - 1 383 IPR036188 -
Viun1g02688 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Viun1g02688 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02688 Viun-Chr1 36643342 36648082 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02688 K11816 - gmx:102668138 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02688 1 36643342 36648082 Viun1g02688 1 36643342 36648082 ECH