Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02682 ATGGCAACAGGCAAAAGTTGCGAGTATGAACAATATGTTCTTGATAGCGAGGATGAAGAAATGAGTGACAGACATGTTGGCAAAGAATTTCTTGAGGATGAAACTAGTCCAACAATGAAAATTCCTTCGACACTCTTCCAGAAAAGACTGCCCAAGCCACCTTGTGAGCAAGTAGAAGCAAACACCACCACTTTTGGGAACTCTACTGCTGAACATAATATGCTTGAAGGCGACAAAAGAGCTTTAGTTGATTCGGACAGCTTTGATGACAAAAACCGTTTATATCCACCTGCAACGCTAAGTCACATTCAGTCACCAGAGCCTGGGAATTCAACCCAGGCTGCTCTTGGCTTTGTGGATCAGTACTTGTCGTCAAATGATATGGACTTGTTTCAAGAAATTCATTGTGGAAAGACCGCTAGGGAGAAATCACCCCATGTCCTCAATGCAAGAGGACCACTAAATCTTGCCAAGAAAATTAAAGCCCGAACTAAAATTGAAGAGAAAAAACCTTTCAAATGGGTGGACAGTTGCCAACATGTCAACAGAGGTCGTATGTTTGGTCAAAAAATTGAAGCATCATCAAGTTTTGGAAGATACAAACAAACATATGCGAGAAGAAGGAAAAAAGGTGGCCATCTTCAGAGCCAAGGAAACTGTAGTACAAGTAATACATTTGATGAGAAGTTAGGCCGGGGACCGAGAATGGCAATTGGAAATAATAACTCTCTAAAGGAAATGAGTGTTCAACCAAGTTCTGTAAGAGAGAATGCTAATGTTTATTCCAGTCTAACACATGTAGAGGACATGTCTGATATTGGTTTAGGCACTCAAATAGCTGCTGAAGCAATGAATGCCTTAGCTTTAATGCCCCCTTATGGCTGCCAGTTCAATGATACCCATCAACCAGAGAATGCAATAGACGGCTCTTTGGCTGATTTCACAGAAAATGAAAATCATCTGAAAAATTCTTCAAATATTCAGAATCCTAGTTTACATTCTATCAAGATAAAATCAAATAAGAAAAAGGCATCCTCCTCTAGATTTAGTAAATTAACTTCTATCTCATCTTGCAAGCACACTGACAAACAGGAGTCAAATGTTGTCTCGGGCAAAATGAAACAAATTATGAAAAGCAAGTCAGCAGCTGAGGGGCGGTTTGAAAATAATAATAGTATGCCAGAATGCAGTAAACATGTATTGCTTGAAGAGGTTTGCCCACTGGGAGAATATACAAGTTTAAGACCTGCTGCCGAAGAAGAATCCGAACATAGGAACAATGAGAGTAGACATCCAAGAATCAAAGATCAACCAAGCCATTGTACAGAGGAGAACAGTGTCAAGGAGAAGGGTATTAAACACAAGAGAAAGGGGACTGATTTAGTGGCTGATCCAGTGAAGTTGGGTGCTAGGACTAAGCGTCTTACATTCTTTTCCAATTCATGTATGCTTGCTAAGAAAGTCAAGTTGAATCATCTGACCGAAGTTAGCCCACAGTTATCAGCAACCCGCAGTTTTTCATGGACTGATTATTGGGTTTATCCAAAAAGATCAAGAGGGAAAAGAAGGGGGGCTAATGCGGGAACGAATCTCAATGCATCATCTGTAATGTGTATTGATGGAAAAGAAAACAATATCTTCTCCACTAGAAGTCTAGAGGACCTGACCGATGCTTCATGTGTTGATGATGCCAGATGCTTGTTACAGGGGAACTTTGTGCCACCAGGCTCATCTAGTGATGCAATGAAGGAACAAAACTTGCCTGATACGCACCCTTTATTGTTGGCACATGTTGAAAGATCATCAAACGAAAGTGTTGCACAATCAAGATCAGGAGTTCGAGCTACAGTTGTGCCAAGTGAAGGTGTAAAAGTTTCAAATGTGAAGCATTCATACATTGAGCATCACAAAAAACTGTGTGTAAAAACCCAGCCTAAGTCTTCACTTTTGAAAGAGCTTACAAGATTAGGAGTTCCTGAGTCCATGTCAGATATGATGTGGAAAGATCTGAGACATCATAGAGGTATGGCAGACGTTCGAGTTCTGTTTAGTCAGCATTTGGATGACAGTATCATTAAGCGGCAAACAAAGATACTGAAACGTCTCAATATATCTGTTGCAACAAGTTCAATGGAGGCCACACATTTCGTAGCTGACAAATTTACACGCACAAAGAATATGTTGGAAGTCATCGCTCTTGGGAAATTAGTTGTGAATCACTTATGGCTCGAGAGCTGTGGACAAGCCAACTGTTTTATTGACGAGAAAAATTACATTCTGAGGGATATGAAAAAGGAAAAGGAAATGGGCTTCAACATGCCAGTTTCTCTTGCTCTCGCAAGAGAAAAGCCACTCCTAAAGGGTAAAAGAGTTTACATCACGCCACATATTAAACCTGATAAGGAAGTGATTGCAAGTTTGGTCACAGCTGTTCATGGCCAGGTAGTAGATCAAAGTGAGGTGTGTGCTGACATGAATGATAATATCTTGGATGATCTGTTGATTCTTTCTTGTGAAGACGACTATGCAATATGCCACCGTTTATTTAAGAAAGGAACTGCAGTTTACAGTTCAGAGCTTGTTCTGAATGGAATTGTAATCCAAAAATTGGAACTGGAGAGACATCAACTCTTCATGAATCAAGTTACAAGGAGTACCAATTGCCCAAGTGCGTCTAATAGGTTTGGTAAGGTTTACAGAAGGCGTCAGAGGCTGATTTAA 2721 0.4035 MATGKSCEYEQYVLDSEDEEMSDRHVGKEFLEDETSPTMKIPSTLFQKRLPKPPCEQVEANTTTFGNSTAEHNMLEGDKRALVDSDSFDDKNRLYPPATLSHIQSPEPGNSTQAALGFVDQYLSSNDMDLFQEIHCGKTAREKSPHVLNARGPLNLAKKIKARTKIEEKKPFKWVDSCQHVNRGRMFGQKIEASSSFGRYKQTYARRRKKGGHLQSQGNCSTSNTFDEKLGRGPRMAIGNNNSLKEMSVQPSSVRENANVYSSLTHVEDMSDIGLGTQIAAEAMNALALMPPYGCQFNDTHQPENAIDGSLADFTENENHLKNSSNIQNPSLHSIKIKSNKKKASSSRFSKLTSISSCKHTDKQESNVVSGKMKQIMKSKSAAEGRFENNNSMPECSKHVLLEEVCPLGEYTSLRPAAEEESEHRNNESRHPRIKDQPSHCTEENSXVKEKGIKHKRKGTDLVADPVKLGARTKRLTFFSNSCMLAKKVKLNHLTEVSPQLSATRSFSWTDYWVYPKRSRGKRRGANAGTNLNASSVMCIDGKENNIFSTRSLEDLTDASCVDDARCLLQGNFVPPGSSSDAMKEQNLPDTHPLLLAHVERSSNESVAQSRSGVRATVVPSEGVKVSNVKHSYIEHHKKLCVKTQPKSSLLKELTRLGVPESMSDMMWKDLRHHRGMADVRVLFSQHLDDSIIKRQTKILKRLNISVATSSMEATHFVADKFTRTKNMLEVIALGKLVVNHLWLESCGQANCFIDEKNYILRDMKKEKEMGFNMPVSLALAREKPLLKGKRVYITPHIKPDKEVIASLVTAVHGQVVDQSEVCADMNDNILDDLLILSCEDDYAICHRLFKKGTAVYSSELVLNGIVIQKLELERHQLFMNQVTRSTNCPSASNRFGKVYRRRQRLI 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02682 907 MobiDBLite consensus disorder prediction 18 35 - -
Viun1g02682 907 SMART BRCT_7 674 751 IPR001357 -
Viun1g02682 907 MobiDBLite consensus disorder prediction 214 228 - -
Viun1g02682 907 CDD BRCT_MDC1_rpt1 680 754 - -
Viun1g02682 907 MobiDBLite consensus disorder prediction 209 240 - -
Viun1g02682 907 Gene3D BRCT domain 669 784 IPR036420 -
Viun1g02682 907 MobiDBLite consensus disorder prediction 413 457 - -
Viun1g02682 907 MobiDBLite consensus disorder prediction 14 40 - -
Viun1g02682 907 MobiDBLite consensus disorder prediction 416 457 - -
Viun1g02682 907 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 67 878 - -
Viun1g02682 907 CDD BRCT_PAXIP1_rpt6_like 786 872 - -
Viun1g02682 907 Gene3D BRCT domain 785 886 IPR036420 -
Viun1g02682 907 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 678 761 IPR001357 -
Viun1g02682 907 SUPERFAMILY BRCT domain 679 777 IPR036420 -
Viun1g02682 907 ProSiteProfiles BRCT domain profile. 698 761 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02682 Viun-Chr1 36610814 36615185 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02682 - K20780 gmx:102659913 1317.75