Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02676 ATGATGCTCAGACTTCGAAGCCGCGACGGCCTGGAGCGAGTAATCGTCGAAAACCCGCACACCACCACAGTGTCGGAGCTAAAACGGATTATCGAAGCCCAATTGAGAATTCCGGTTCACAACCAAACCCTTTCCACCAACCAGAACCTTCTATTGGCGAAATCGCGTGAAGATCTCCATCGATTCACCGATATGGCCAACCCCGACCTCACTCTCTCATCTCTCAACCTCGCCCACGGCTCAATCGTCTTTTTGACTTACGAAGGCGAGCGCCACGTGGCGGGCCCCGCCTTCAACCCGGCGGGCTCCTTCGGCCGCAAGATGACCATGGACGACCTCATCGCCAAGCAGATGCGCGTCACGCGCCAGGAGAATCCGCACTGCGAGCTCGTCTCCTTCGACCGCGACTGCGCCAACGCGTTCCAGCACTACGTGAACGACACGCTCGCCTTCGCGGTCAAGCGCGGCGGCTTCATGTATGGCACAGTTTCCGAGGAGGGGAAGGTGGAGGTGGACTTCATCTACGAGCCGCCGCAGCAGGGGTCCGAAGAAAATCTCTTGTTTTTCAGAGACCCCGAAGAGGAGAAACTCGTGGAGGCTATTGCGGCGGGGTTGGGGATGAGGAGGGTAGGGTTCATTTTCACGCAGACTATAAGCCAGGACAAGAAGGACTATACTTTATCGAATAGGGAGGTGCTTCAGGCTGCGGAGTACCATGCTGAGAGTGGATTGAAAGAGTGGGTTACTGCGGTTGTTAAGCTTGAGGTGAATGAAGATATGGGTGCGGATGTGCATTTTGAAGCGTTTCAGATTAGTGATGTGTGCGTGAGATTGTTCAAGGAAGGGTGGTTTGAGACCGAGATAAAGGACGACGATGATCCCAAGTTGTCTAAGATGAAGAAGGATGTGGTTGTCGGGGTTAAGGATACCAAAGAAGTTGACAATGATTTCTTCTTGGTCGTCGTCAAAATCTCAGATCATCAGGGTCCTCTTTCATCATCGTTTCCCATTGAGAACCGGAACACTCAGATGACTATGAAGGCTTTGAGGAATCATCTGGACAGGACAAAAAGTCTTCCATTTGTGAAGCGAATTTCTGATTTTCACCTTCTTCTTGTACTGGCAAGGGTTTTAGACCTGAATGCTGATGTCCCTGCATTGACGGCATGTGTGCAGACACAGACATCTATACCAGAAGGTTACCAGATCCTTATTGAGTCTATGGCAAATGCCGCTTGA 1239 0.5165 MMLRLRSRDGLERVIVENPHTTTVSELKRIIEAQLRIPVHNQTLSTNQNLLLAKSREDLHRFTDMANPDLTLSSLNLAHGSIVFLTYEGERHVAGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEENLLFFRDPEEEKLVEAIAAGLGMRRVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMGADVHFEAFQISDVCVRLFKEGWFETEIKDDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSSFPIENRNTQMTMKALRNHLDRTKSLPFVKRISDFHLLLVLARVLDLNADVPALTACVQTQTSIPEGYQILIESMANAA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02676 412 FunFam NPL4-like protein 1 1 100 - -
Viun1g02676 412 Pfam Nuclear pore localisation protein NPL4 1 85 IPR024682 -
Viun1g02676 412 SUPERFAMILY Ubiquitin-like 1 90 IPR029071 -
Viun1g02676 412 Gene3D - 1 101 - -
Viun1g02676 412 ProSiteProfiles Ubiquitin domain profile. 1 85 IPR000626 GO:0005515
Viun1g02676 412 CDD Ubl_AtNPL4_like 1 86 - -
Viun1g02676 412 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
Viun1g02676 412 Pfam NPL4 family 157 283 IPR007717 -
Viun1g02676 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 89 IPR016563 GO:0006511
Viun1g02676 412 CDD MPN_NPL4 119 374 IPR007717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02676 K14015 - gmx:100811623 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02676 1 36550081 36553673 Viun1g02676 1 36550081 36553673 ECH