Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02657 ATGGAACGTCAGGGTCATGATTATACAGCTGCATCTGCTATGGCATATGCTCAGCAACAGAGGCAAGCTGCTAATATGCAGCAGCAACAACAACAACAACAGTTTGGATTTCATCCTCAGCATCAGCAGTTTCCTTCATCAATGCACGGTCCTCCTTTTATACCCCCAGGTCCAGGTCCTGCACACCCTCCTATGCAACAATTCCCGTATCATCATGCCTTGCAGCAGCAGCAGCAACCACTTCCACAATTACACCCTCATGCCCCTCCCCCGCCCCATCTCCTTCTTCAGCAGCAGCACCAAGGACCGCCTGCATTCCCTTCACATTATCCTCCTTCTCTTGTTCCATCTCCTTTTTATGATTCTGCCCCACCCCCAGTCGCCCCCCCTTCTGATCCGGATCTCCACAAGCGAATAGACAAGCTTGTTGAGTATGCAGTGAAAAACGGCCCCGATTTTGAAGCTATGATATGTGAAAAGCAGCGTGATAATCCTTCATATAGTTTCCTCTTTGGTGGGGAAGGCCACGGTTACTACCGTTATAAGCTCTGGTTATCAACTCGTCCACCGGGTGGTCCATTCAACCCACCTTTCCCATCATCTTCCATGCCCATGATCCACCCCCCTCCAAATCCAATGATGAATCCGTCTCCTCTAAATGCCTCTCCAATGAATCCTGCAGGAATAGGGTCTTCACCTTCAATGCTAGGCCCACCTCCTTTCCAACAGTTCTATGATCAACAACACCACCATCAGCATTCTCAATCTTTTGGTCTCCCTGGGCGGCCTGAGTATGATCAGTCATCCAAGTCTTTCAAAGGACCCTCTGGGCCACTTCCACCTGATGTCGCAATGGAGCTCAATAACGTTCTTAACAATTTAAATGGTACAAAAGAATCCATCAAAGGTGCGAAACTTTGGTTCATGCAGAGATCTCCATTTGCACCATCCCTAGCAGAGGCTCTTAGAGACAGGGTCTTTGCATTGGATGATGTCGAGAGACAGTTACACATAATTTACCTTGCCAATGACATCCTTTTTGACAGCTTAAATCGGAGAACAAATGGCAATGACCTTGACAGTGAAGCTCTTGCCTTTAAACCTGTTTTAGGCTCCATGCTTGCAAGAATTTATCATAACCCGCAGAGCAATGAGGAATACAGGAAAAGATTGCAGCAAATGGTGGAGTTCTGGGCCTCTAAAACGGTATACGATCAGGATACTATATCTTTACTTAAGGGTGAGATGATTGGTGGGCTTCAAACAAGTCCTTTTCCTGGGGCTTCAAAGGATTTATCTTCTGCTTCAGCAGAATCAGTTGCAGGAGTTTTGCAGACACCTAACCATGCTGCTCAGCAATGGCAAGGTGATAGGTTAGGCTCTGGTTCAAATGTCTTAGATCAAGATCGTACTGATAAGCATGCAGCTCCAGCACAGTCACTATCTGTACCCCTAGCAGCTCAGCAGTTTCTTCCAAATGCTGCTCCTCCTAGTGCCTTTCCTGGGTCCATGGCTATTCCATCTTCTGTTCAACCTGCTAACCAAGCACCTGGTGGTGTTCATTTATTGCCCCCTCAATCATCCAGCACCGGTGAACAATTGCCACCATATCCATTATTCCCACCTGGTCTCATTCCTGGAATGGTTAGAAAGATGCAGATCGGTAGTGGGGTTCCATATTCTCCATTGAGCCCTTTGGATATCCCAACCATCATACCGCCATCAACTGTGCCACCATCAGAAATTCTTCAAAGAGTGTCAAAATTCTTTAAGGAAATTGGAGAGGTAAATCCTTCTGAGGGTCCTATGAATTCTGATTCAAGAGATGAAGATGATGAATATGATAGAGAATTTGAGAGGGAGCCAGCAGTACGAAAGGGAGGTGCTTGTATACCTCCACCTCCAAACTTGCAGGTTGATCCAGAGACAGGGACCTATGTTGATGGGACAGTAGAACGGAAACCTGGATCCAGTGGCTCGGGCAGGTTAGGGCTGGGGGCCACAGCTAATCCCAACGAGGTGAGTCAGTATGATGATGTATATACATCTTACAGGAAGCAGAGAAGCACCAATTACCATTCATCAATGAGTGCTAGAGCCGCAGCAAGATGA 2112 0.4702 MERQGHDYTAASAMAYAQQQRQAANMQQQQQQQQFGFHPQHQQFPSSMHGPPFIPPGPGPAHPPMQQFPYHHALQQQQQPLPQLHPHAPPPPHLLLQQQHQGPPAFPSHYPPSLVPSPFYDSAPPPVAPPSDPDLHKRIDKLVEYAVKNGPDFEAMICEKQRDNPSYSFLFGGEGHGYYRYKLWLSTRPPGGPFNPPFPSSSMPMIHPPPNPMMNPSPLNASPMNPAGIGSSPSMLGPPPFQQFYDQQHHHQHSQSFGLPGRPEYDQSSKSFKGPSGPLPPDVAMELNNVLNNLNGTKESIKGAKLWFMQRSPFAPSLAEALRDRVFALDDVERQLHIIYLANDILFDSLNRRTNGNDLDSEALAFKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWASKTVYDQDTISLLKGEMIGGLQTSPFPGASKDLSSASAESVAGVLQTPNHAAQQWQGDRLGSGSNVLDQDRTDKHAAPAQSLSVPLAAQQFLPNAAPPSAFPGSMAIPSSVQPANQAPGGVHLLPPQSSSTGEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTIIPPSTVPPSEILQRVSKFFKEIGEVNPSEGPMNSDSRDEDDEYDREFEREPAVRKGGACIPPPPNLQVDPETGTYVDGTVERKPGSSGSGRLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAAAR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02657 703 MobiDBLite consensus disorder prediction 49 65 - -
Viun1g02657 703 Pfam CID domain 286 410 IPR006569 -
Viun1g02657 703 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 124 702 IPR039037 GO:0006874
Viun1g02657 703 Gene3D - 284 418 IPR008942 -
Viun1g02657 703 MobiDBLite consensus disorder prediction 246 280 - -
Viun1g02657 703 MobiDBLite consensus disorder prediction 449 473 - -
Viun1g02657 703 SMART 558neu5 286 417 IPR006569 -
Viun1g02657 703 MobiDBLite consensus disorder prediction 1 135 - -
Viun1g02657 703 Pfam Surp module 139 184 IPR000061 GO:0003723|GO:0006396
Viun1g02657 703 MobiDBLite consensus disorder prediction 594 703 - -
Viun1g02657 703 MobiDBLite consensus disorder prediction 449 466 - -
Viun1g02657 703 ProSiteProfiles CID domain profile. 279 420 IPR006569 -
Viun1g02657 703 MobiDBLite consensus disorder prediction 663 697 - -
Viun1g02657 703 SUPERFAMILY Surp module (SWAP domain) 110 185 IPR035967 GO:0003723|GO:0006396
Viun1g02657 703 ProSiteProfiles SURP motif repeat profile. 138 182 IPR000061 GO:0003723|GO:0006396
Viun1g02657 703 MobiDBLite consensus disorder prediction 83 97 - -
Viun1g02657 703 SMART surpneu2 136 188 IPR000061 GO:0003723|GO:0006396
Viun1g02657 703 Gene3D Surp module 123 188 IPR035967 GO:0003723|GO:0006396
Viun1g02657 703 MobiDBLite consensus disorder prediction 13 47 - -
Viun1g02657 703 MobiDBLite consensus disorder prediction 105 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02657 Viun-Chr1 36421116 36425198 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02657 - - gmx:100816468 1035.02