Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02652 ATGATGAAAACAAAGCAGAAGCGCACAGGAAAAGTCCCAAGTAAAAAAAGTGGTACTTCTTCGCATGACCCTGTTGATTCTCGAGATCGTGACAAAGAGCATGAGGATAGTGATTGGGTTATAGTGAAAAAGCAGAGAGTAACCATTCTGGTGCCTGCTGTGCCTCTCAGTGAGAGATCGTTAATAGCAAACCAAGGACCAAATCATACGCAACTTATGCCTCCTGAATTGGCAAGTAACCATGTGCAGCTTCCCATGGAGACATCTACTCTACATCCTTCAGATAATGAACATGAAAAAACCTTTTTATTGGCTGCTCAAAAAGAGACTCGTACCGAGAATAGAGCACCTCCTATCTTACCTAGACCAACTGTGGTCAATCCATCATCTTCAGATCAGAGAACAGAATCAGAAAATCCACGTCAAATGAGTGGTTTGAAGTCACATAAAGTACTTGGAATTTCTAATACGTCAAAAGTTATTAAGCAGCCCAGAACACTACTTGCACCAAGAAGGCCCTCCAACCTGGAAACTTTGAATAAAAACTTGAGAGCATCAAATTTGGTGAGGAAGCTTGAAAGAGCTGGTGGACTGAGCAAGTGGTTGATATCACTTGGACTGGGGCAGTTTGTGAGAATTTTTCAGGGTAAAGGTCTCAGTAAGTATCAGCTGGTAAATCTAACTATGAAAAAACTCAAGGATATGGGTGCCAATGCAGTGGGACCTCGCAGGAAACTGATCCATGCCATGGACTGTGTTTGTCAGCCATATTGCTTTGAGGCATTGTAA 789 0.4233 MMKTKQKRTGKVPSKKSGTSSHDPVDSRDRDKEHEDSDWVIVKKQRVTILVPAVPLSERSLIANQGPNHTQLMPPELASNHVQLPMETSTLHPSDNEHEKTFLLAAQKETRTENRAPPILPRPTVVNPSSSDQRTESENPRQMSGLKSHKVLGISNTSKVIKQPRTLLAPRRPSNLETLNKNLRASNLVRKLERAGGLSKWLISLGLGQFVRIFQGKGLSKYQLVNLTMKKLKDMGANAVGPRRKLIHAMDCVCQPYCFEAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02652 262 MobiDBLite consensus disorder prediction 1 37 - -
Viun1g02652 262 Gene3D - 193 251 IPR013761 -
Viun1g02652 262 Pfam SAM domain (Sterile alpha motif) 198 252 IPR001660 GO:0005515
Viun1g02652 262 ProSiteProfiles SAM domain profile. 198 256 IPR001660 GO:0005515
Viun1g02652 262 MobiDBLite consensus disorder prediction 21 37 - -
Viun1g02652 262 MobiDBLite consensus disorder prediction 125 148 - -
Viun1g02652 262 CDD SAM_superfamily 198 249 - -
Viun1g02652 262 SUPERFAMILY SAM/Pointed domain 197 255 IPR013761 -
Viun1g02652 262 MobiDBLite consensus disorder prediction 109 148 - -
Viun1g02652 262 SMART SAM_4 190 256 IPR001660 GO:0005515
Viun1g02652 262 PANTHER SCP160 116 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02652 Viun-Chr1 36403584 36405850 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02652 - - gmx:100804141 427.943